RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 FAM227AF5H4B4 570 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 SCAMP1O15126 338 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 MAN1A2O60476 641 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 RAB36O95755 333 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 GAAP10253 952 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 NID1P14543 1247 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 NME1P15531 152 aaKnown RBP8.97□□□□□ -0.97
CHKA-207ENST00000533728 CD27P26842 260 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 SOX18P35713 384 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 ETV6P41212 452 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 POU6F2P78424 691 aaPredicted RBP8.97□□□□□ -0.97
CHKA-207ENST00000533728 TMED1Q13445 227 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 C1DQ13901 141 aaKnown RBP8.97□□□□□ -0.97
CHKA-207ENST00000533728 ELOCQ15369 112 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 DUSP5Q16690 384 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 SYT16Q17RD7 645 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 RGS21Q2M5E4 152 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 SYT14P1Q58G82 188 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 ARMC4Q5T2S8 1044 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 ZNF836Q6ZNA1 936 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 PLEKHM3Q6ZWE6 761 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 GDF7Q7Z4P5 450 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 IGFN1Q86VF2 1251 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 C17orf82Q86X59 251 aaPredicted RBP8.97□□□□□ -0.97
CHKA-207ENST00000533728 GKN2Q86XP6 184 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 MARCH9Q86YJ5 346 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 MFSD4AQ8N468 514 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 TCEANCQ8N8B7 351 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 C19orf47Q8N9M1 422 aaKnown RBP8.97□□□□□ -0.97
CHKA-207ENST00000533728 OR6C4Q8NGE1 309 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 OR9Q1Q8NGQ5 310 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 MCFD2Q8NI22 146 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 WDR36Q8NI36 951 aaKnown RBP8.97□□□□□ -0.97
CHKA-207ENST00000533728 CDS1Q92903 461 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 RFKQ969G6 155 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 SLC41A3Q96GZ6 507 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 HS6ST2Q96MM7 605 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 SLC6A18Q96N87 628 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 FCRL4Q96PJ5 515 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 CCDC3Q9BQI4 270 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 TSSK6Q9BXA6 273 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 GPR174Q9BXC1 333 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 MROQ9BYG7 248 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 FN3KQ9H479 309 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 AMBNQ9NP70 447 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 EQTNQ9NQ60 294 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 SELENONQ9NZV5 590 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 EPHA6Q9UF33 1036 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.97□□□□□ -0.97
CHKA-207ENST00000533728 CYP8B1Q9UNU6 501 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 MRPS33Q9Y291 106 aaKnown RBP8.97□□□□□ -0.97
CHKA-207ENST00000533728 TMEM5Q9Y2B1 443 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 EXOSC1Q9Y3B2 195 aaKnown RBP8.97□□□□□ -0.97
CHKA-207ENST00000533728 UGT2A1Q9Y4X1 527 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 PMF1-BGLAPU3KQ54 211 aa8.97□□□□□ -0.97
CHKA-207ENST00000533728 BSNQ9UPA5 3926 aa8.96□□□□□ -0.97
CHKA-207ENST00000533728 TRBV23OR9-2A0A075B6M9 112 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 IGHV1OR15-9A0A0B4J2B8 117 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 PNMA8CA0A1B0GUJ8 204 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 HTR3EA5X5Y0 456 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 METTL12A8MUP2 240 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 ARHGAP33O14559 1287 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 TLX3O43711 291 aaPredicted RBP8.96□□□□□ -0.98
CHKA-207ENST00000533728 FGF17O60258 216 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 BRINP1O60477 761 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 TPST2O60704 377 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 SOX14O95416 240 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 NSA2O95478 260 aaKnown RBP8.96□□□□□ -0.98
CHKA-207ENST00000533728 CSF2P04141 144 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 RNH1P13489 461 aaKnown RBP8.96□□□□□ -0.98
CHKA-207ENST00000533728 TNNI3P19429 210 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 GRK5P34947 590 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 SOX6P35712 828 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 ZNF136P52737 540 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 PPP5CP53041 499 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 EPHA4P54764 986 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 PSMD4P55036 377 aaKnown RBP8.96□□□□□ -0.98
CHKA-207ENST00000533728 BNC1Q01954 994 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 ZNF45Q02386 682 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 PRKCDQ05655 676 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 CAMK2BQ13554 666 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 SPHARQ15513 63 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 SNAPC1Q16533 368 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 TRIM61Q5EBN2 209 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 DCST2Q5T1A1 773 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 ACSM5Q6NUN0 579 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 ZNF613Q6PF04 617 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 DCDC5Q6ZRR9 648 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 ATCAYQ86WG3 371 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 KIF18BQ86Y91 864 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 ZNF595Q8IYB9 648 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 NLGN4XQ8N0W4 816 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 TMCO5AQ8N6Q1 288 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 COX18Q8N8Q8 333 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 DRAXINQ8NBI3 349 aaPredicted RBP8.96□□□□□ -0.98
CHKA-207ENST00000533728 POGLUT1Q8NBL1 392 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 BRIX1Q8TDN6 353 aaKnown RBP8.96□□□□□ -0.98
CHKA-207ENST00000533728 SLC9A6Q92581 669 aa8.96□□□□□ -0.98
CHKA-207ENST00000533728 ANKRD9Q96BM1 317 aaPredicted RBP8.96□□□□□ -0.98
CHKA-207ENST00000533728 HSPBAP1Q96EW2 488 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms