RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 STATHP02808 62 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 CD99P14209 185 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 IGFBP2P18065 325 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 PTGER1P34995 402 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 IFITM3Q01628 133 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 GANABQ14697 944 aaKnown RBP7.58□□□□□ -1.2
NEDD8-207ENST00000533242 OR1C1Q15619 314 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 SYT16Q17RD7 645 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 SYT6Q5T7P8 510 aaPredicted RBP7.58□□□□□ -1.2
NEDD8-207ENST00000533242 DCDC5Q6ZRR9 648 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 OLIG3Q7RTU3 272 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 CPEB2Q7Z5Q1 589 aaKnown RBP7.58□□□□□ -1.2
NEDD8-207ENST00000533242 PAQR7Q86WK9 346 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 DOLPP1Q86YN1 238 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 PLD3Q8IV08 490 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 CROCCP3Q8IVE0 287 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 HOMEZQ8IX15 550 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 ARHGEF39Q8N4T4 335 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 SETD9Q8NE22 299 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 OR52N2Q8NGI0 321 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 CA5BP1Q8WTZ4 195 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 RORBQ92753 470 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 SH3YL1Q96HL8 342 aaPredicted RBP7.58□□□□□ -1.2
NEDD8-207ENST00000533242 SIGLEC12Q96PQ1 595 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 F2RL3Q96RI0 385 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 DPH7Q9BTV6 452 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 EFCAB11Q9BUY7 163 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 MYNNQ9NPC7 610 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 FAIMQ9NVQ4 179 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 TAS2R16Q9NYV7 291 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 TAS2R9Q9NYW1 312 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 COQ3Q9NZJ6 369 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 TNFRSF10DQ9UBN6 386 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 C19orf25Q9UFG5 118 aaPredicted RBP7.58□□□□□ -1.2
NEDD8-207ENST00000533242 TAC3Q9UHF0 121 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 SH3GLB1Q9Y371 365 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 DYRK1BQ9Y463 629 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 SETD2Q9BYW2 2564 aaPredicted RBP7.58□□□□□ -1.2
NEDD8-207ENST00000533242 AKAP9Q99996 3911 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 CCDC168Q8NDH2 2452 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 A0A0G2JN53 185 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 A0A1W2PRB8 838 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 BOLA2-SMG1P6H3BVE0 249 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 PRRG2O14669 202 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 FFAR1O14842 300 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 FOXS1O43638 330 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 GRK5P34947 590 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 SOAT1P35610 550 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 LIPAP38571 399 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 CD96P40200 585 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 EFNA3P52797 238 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 PCBP3P57721 371 aaKnown RBP7.58□□□□□ -1.2
NEDD8-207ENST00000533242 CXCR4P61073 352 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 CDK6Q00534 326 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 SPIBQ01892 262 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 RELAQ04206 551 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 MAPK11Q15759 364 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 BTBD16Q32M84 506 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 GCNT6Q5T4J0 391 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 TMIGD1Q6UXZ0 262 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 COMTD1Q86VU5 262 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 CENPSQ8N2Z9 138 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 OR10G2Q8NGC3 310 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 M1APQ8TC57 530 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 MIPOL1Q8TD10 442 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 ASB5Q8WWX0 329 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 APOL4Q9BPW4 351 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 AICDAQ9GZX7 198 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 TSPAN10Q9H1Z9 355 aaPredicted RBP7.58□□□□□ -1.2
NEDD8-207ENST00000533242 EHD1Q9H4M9 534 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 KLHL1Q9NR64 748 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 ZNF226Q9NYT6 803 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 TPRKBQ9Y3C4 175 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 PCDHGB3Q9Y5G1 929 aa7.58□□□□□ -1.2
NEDD8-207ENST00000533242 A0A0A6YYC8 382 aaPredicted RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 I3L1I5 382 aaPredicted RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 M0R082 166 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 RGS10O43665 173 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 SP1P08047 785 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 ERGP11308 486 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 HOXB6P17509 224 aaKnown RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 GABRB1P18505 474 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 IDH2P48735 452 aaKnown RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 LIM2P55344 173 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 FAM53BQ14153 422 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 EXT1Q16394 746 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 NDUFA9Q16795 377 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 FCRLBQ6BAA4 426 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 TNFAIP8L2Q6P589 184 aaPredicted RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 WDR53Q7Z5U6 358 aaPredicted RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 LGI4Q8N135 537 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 HORMAD2Q8N7B1 307 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 AMER2Q8N7J2 671 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 DYNC2LI1Q8TCX1 351 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 TRUB1Q8WWH5 349 aaKnown RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 RAB8BQ92930 207 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 GTPBP3Q969Y2 492 aaKnown RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 RERGQ96A58 199 aaPredicted RBP7.57□□□□□ -1.2
NEDD8-207ENST00000533242 MACROD1Q9BQ69 325 aa7.57□□□□□ -1.2
NEDD8-207ENST00000533242 SPATA9Q9BWV2 254 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms