RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 RGNQ15493 299 aa17.21■□□□□ 0.35
PACSIN3-208ENST00000531226 ACSF3Q4G176 576 aaPredicted RBP17.21■□□□□ 0.35
PACSIN3-208ENST00000531226 XKRXQ6PP77 449 aa17.21■□□□□ 0.35
PACSIN3-208ENST00000531226 CBLN3Q6UW01 205 aa17.21■□□□□ 0.35
PACSIN3-208ENST00000531226 PIGQQ9BRB3 760 aa17.21■□□□□ 0.35
PACSIN3-208ENST00000531226 RUBCNLQ9H714 662 aa17.21■□□□□ 0.35
PACSIN3-208ENST00000531226 THUMPD1Q9NXG2 353 aaKnown RBP17.21■□□□□ 0.35
PACSIN3-208ENST00000531226 ICAM5Q9UMF0 924 aa17.21■□□□□ 0.35
PACSIN3-208ENST00000531226 CARD8Q9Y2G2 431 aa17.21■□□□□ 0.35
PACSIN3-208ENST00000531226 L3MBTL1Q9Y468 752 aa17.21■□□□□ 0.35
PACSIN3-208ENST00000531226 GMEB1Q9Y692 573 aa17.21■□□□□ 0.35
PACSIN3-208ENST00000531226 A1L4Q6 167 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 FAM47E-STBD1D6RA91 191 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 LINC01387J3KSC0 135 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 GTPBP1O00178 669 aaKnown RBP17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 ZNF264O43296 627 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 EIF4E2O60573 245 aaKnown RBP17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 CLDN1O95832 211 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 SNRPB2P08579 225 aaKnown RBP17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 GLI4P10075 376 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 BMP2P12643 396 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 ZNF708P17019 499 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 ZNF17P17021 662 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 PPIBP23284 216 aaKnown RBP17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 ADH7P40394 386 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 STARP49675 285 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 CLDN18P56856 261 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 FGFBP1Q14512 234 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 SF3B4Q15427 424 aaKnown RBP eCLIP17.2■□□□□ 0.342e-6■■■■□ 21.5
PACSIN3-208ENST00000531226 MAPK11Q15759 364 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 MAPK14Q16539 360 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 TMEM44Q2T9K0 475 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 PLPPR5Q32ZL2 321 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 NDUFAF6Q330K2 333 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 DPP10Q8N608 796 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 OR5M1Q8NGP8 315 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 RND1Q92730 232 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 ZBTB8AQ96BR9 441 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 KLHDC3Q9BQ90 382 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 SAR1AQ9NR31 198 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 MED17Q9NVC6 651 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 COL12A1Q99715 3063 aa17.2■□□□□ 0.34
PACSIN3-208ENST00000531226 C7orf72A4D263 438 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 H0Y3Z8 333 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 EPPINO95925 133 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 CSTAP01040 98 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 BCHEP06276 602 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 PEPDP12955 493 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 PMPCAQ10713 525 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 BCL2A1Q16548 175 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 DLEU7Q6UYE1 221 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 MAMDC2Q7Z304 686 aaPredicted RBP17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 DHDDSQ86SQ9 333 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 RETREG3Q86VR2 466 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 TOR1AIP2Q8NFQ8 470 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 ZPLD1Q8TCW7 415 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 PMM1Q92871 262 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 ZG16BQ96DA0 208 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 QRSL1Q9H0R6 528 aaKnown RBP17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 COQ3Q9NZJ6 369 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 CALML5Q9NZT1 146 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 PLEKHB1Q9UF11 243 aaPredicted RBP17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 SLC35A3Q9Y2D2 325 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 DSPPQ9NZW4 1301 aa17.19■□□□□ 0.34
PACSIN3-208ENST00000531226 AGAP5A6NIR3 686 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 SHISA8B8ZZ34 492 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 H3BML4 177 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 NUDT14O95848 222 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 TFPTP0C1Z6 253 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 LINGO3P0C6S8 592 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 POU3F2P20265 443 aaPredicted RBP17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 RPS4Y1P22090 263 aaKnown RBP17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 ADSLP30566 484 aaPredicted RBP17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 LSP1P33241 339 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 PGM1P36871 562 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 SEC24CP53992 1094 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 CRISP3P54108 245 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 SRYQ05066 204 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 KLF10Q13118 480 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 SKP2Q13309 424 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 SEM1Q6ZVN7 128 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 EIF3MQ7L2H7 374 aaKnown RBP17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 HMGN2P46Q86SG4 172 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 LACC1Q8IV20 430 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 GTPBP8Q8N3Z3 284 aaPredicted RBP17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 TMCO5AQ8N6Q1 288 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 FAM71CQ8NEG0 241 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 OR5W2Q8NH69 310 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 SLC38A5Q8WUX1 472 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 SDCCAG3Q96C92 435 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 ARSGQ96EG1 525 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 NPAS1Q99742 590 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 LAT2Q9GZY6 243 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 MTHFD2LQ9H903 347 aaPredicted RBP17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 CORO2BQ9UQ03 480 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 RNF6Q9Y252 685 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 ZNF337Q9Y3M9 751 aa17.18■□□□□ 0.34
PACSIN3-208ENST00000531226 TMEM247A6NEH6 219 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms