RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 SHC1P29353 583 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 APOBEC3AP31941 199 aaPredicted RBP7.19□□□□□ -1.26
CD44-232ENST00000531118 UBA52P62987 128 aaKnown RBP7.19□□□□□ -1.26
CD44-232ENST00000531118 TRIP10Q15642 601 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 ERCC6LQ2NKX8 1250 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 TCHHL1Q5QJ38 904 aaPredicted RBP7.19□□□□□ -1.26
CD44-232ENST00000531118 FAM180BQ6P0A1 224 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 TRMT10BQ6PF06 316 aaKnown RBP7.19□□□□□ -1.26
CD44-232ENST00000531118 FCRLAQ7L513 359 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 SLC46A3Q7Z3Q1 461 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 MARCH3Q86UD3 253 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 P2RY8Q86VZ1 359 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 SLC44A2Q8IWA5 706 aaPredicted RBP7.19□□□□□ -1.26
CD44-232ENST00000531118 CTAGE4Q8IX94 777 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 ZDHHC22Q8N966 263 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 NUP43Q8NFH3 380 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 OR52N5Q8NH56 324 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 MAIP1Q8WWC4 291 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 OSTF1Q92882 214 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 CNRIP1Q96F85 164 aaPredicted RBP7.19□□□□□ -1.26
CD44-232ENST00000531118 REXO5Q96IC2 774 aaKnown RBP7.19□□□□□ -1.26
CD44-232ENST00000531118 RNF145Q96MT1 663 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 SUCNR1Q9BXA5 334 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 CD244Q9BZW8 370 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 TSPY26PQ9H489 355 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 COQ10BQ9H8M1 238 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 NUDT4Q9NZJ9 180 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 OPTCQ9UBM4 332 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 OR10H1Q9Y4A9 318 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 ACTL7BQ9Y614 415 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 SLC25A15Q9Y619 301 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 RYR2Q92736 4967 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 DNAH3Q8TD57 4116 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 A0A087WZY1 265 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 GOLGA6L10A0A0M3HER8 536 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 A0A1W2PR80 420 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 C1orf226A1L170 272 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 H0YIV9 168 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 BCAS2O75934 225 aaPredicted RBP7.18□□□□□ -1.26
CD44-232ENST00000531118 SLU7O95391 586 aaKnown RBP7.18□□□□□ -1.26
CD44-232ENST00000531118 CLDN9O95484 217 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 ANGPTL1O95841 491 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 HKR1P10072 659 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 ME2P23368 584 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 CHRNEQ04844 493 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 MLC1Q15049 377 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 MST1LQ2TV78 715 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 PLPPR5Q32ZL2 321 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 SH2D4BQ5SQS7 431 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 TTC27Q6P3X3 843 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 IGDCC3Q8IVU1 814 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 ZNF433Q8N7K0 673 aaPredicted RBP7.18□□□□□ -1.26
CD44-232ENST00000531118 TRIM58Q8NG06 486 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 OR9A2Q8NGT5 310 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 WDR20Q8TBZ3 569 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 POC1BQ8TC44 478 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 DUSP19Q8WTR2 217 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 SLC9A6Q92581 669 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 ZBTB8AQ96BR9 441 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 ERP27Q96DN0 273 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 WDR89Q96FK6 387 aaPredicted RBP7.18□□□□□ -1.26
CD44-232ENST00000531118 CFAP36Q96G28 342 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 SLC6A7Q99884 636 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 VRK1Q99986 396 aaPredicted RBP7.18□□□□□ -1.26
CD44-232ENST00000531118 PSD2Q9BQI7 771 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 RSRP1Q9BUV0 290 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 CXorf36Q9H7Y0 433 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 UNKLQ9H9P5 680 aaKnown RBP7.18□□□□□ -1.26
CD44-232ENST00000531118 FKRPQ9H9S5 495 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 BCO1Q9HAY6 547 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 PFDN4Q9NQP4 134 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 MED29Q9NX70 200 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 ING1Q9UK53 422 aaPredicted RBP7.18□□□□□ -1.26
CD44-232ENST00000531118 WBP11Q9Y2W2 641 aaKnown RBP7.18□□□□□ -1.26
CD44-232ENST00000531118 PTGDR2Q9Y5Y4 395 aa7.18□□□□□ -1.26
CD44-232ENST00000531118 A0A1W2PRB8 838 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 B4DSR2 109 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 SUPT3HB4E1H0 165 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 PHGDHO43175 533 aaKnown RBP7.17□□□□□ -1.26
CD44-232ENST00000531118 RGS14O43566 566 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 SUPT3HO75486 399 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 IL33O95760 270 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 KLK1P06870 262 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 YES1P07947 543 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 LTA4HP09960 611 aaKnown RBP7.17□□□□□ -1.26
CD44-232ENST00000531118 PGCP20142 388 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 ELK4P28324 431 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 SFTPDP35247 375 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 PIK3CGP48736 1102 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 CLK3P49761 638 aaKnown RBP7.17□□□□□ -1.26
CD44-232ENST00000531118 ZNF41P51814 821 aaPredicted RBP7.17□□□□□ -1.26
CD44-232ENST00000531118 MAPK12P53778 367 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 ATP6V0D1P61421 351 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 PSG6Q00889 435 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 FOXF1Q12946 379 aa7.17□□□□□ -1.26
CD44-232ENST00000531118 CSTF3Q12996 717 aaKnown RBP7.17□□□□□ -1.26
CD44-232ENST00000531118 CPSF6Q16630 551 aaKnown RBP eCLIP7.17□□□□□ -1.26
CD44-232ENST00000531118 ARL13AQ5H913 290 aaPredicted RBP7.17□□□□□ -1.26
CD44-232ENST00000531118 RNASEH2BQ5TBB1 312 aaKnown RBP7.17□□□□□ -1.26
CD44-232ENST00000531118 LIPJQ5W064 366 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms