RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 NTSP30990 170 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 HSPA1LP34931 641 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 GNPDA1P46926 289 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 EXOSC2Q13868 293 aaKnown RBP1.68□□□□□ -2.14
NUP98-218ENST00000530516 SHHQ15465 462 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 TIGITQ495A1 244 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 OR6B2Q6IFH4 312 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 ETFRF1Q6IPR1 90 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 WASH2PQ6VEQ5 465 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 DNM1P46Q6ZS02 220 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 RNF165Q6ZSG1 346 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 LPCAT2Q7L5N7 544 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 RABEPKQ7Z6M1 372 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 TMEM110Q86TL2 294 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 LINC01561Q8N1V8 128 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 OR9A1PQ8NGU1 263 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 BLOC1S5Q8TDH9 187 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 NCLNQ969V3 563 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 RPUSD4Q96CM3 377 aaKnown RBP1.68□□□□□ -2.14
NUP98-218ENST00000530516 CITED1Q99966 193 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 RTBDNQ9BSG5 229 aaPredicted RBP1.68□□□□□ -2.14
NUP98-218ENST00000530516 NFKBIZQ9BYH8 718 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 SRXN1Q9BYN0 137 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 ALDH8A1Q9H2A2 487 aaPredicted RBP1.68□□□□□ -2.14
NUP98-218ENST00000530516 PPDPFQ9H3Y8 114 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 SYTL2Q9HCH5 934 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 ZNF223Q9UK11 482 aaPredicted RBP1.68□□□□□ -2.14
NUP98-218ENST00000530516 SCML2Q9UQR0 700 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 NUDCQ9Y266 331 aa1.68□□□□□ -2.14
NUP98-218ENST00000530516 MTCL1Q9Y4B5 1905 aaKnown RBP1.68□□□□□ -2.14
NUP98-218ENST00000530516 RPGRIP1LQ68CZ1 1315 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 IGKV2D-24A0A075B6R9 120 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.67□□□□□ -2.14
NUP98-218ENST00000530516 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.67□□□□□ -2.14
NUP98-218ENST00000530516 LRCOL1A6NCL2 159 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 A8MUA0 341 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 HCN1O60741 890 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 BCAS2O75934 225 aaPredicted RBP1.67□□□□□ -2.14
NUP98-218ENST00000530516 ANXA3P12429 323 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 SFNP31947 248 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 HPDP32754 393 aaPredicted RBP1.67□□□□□ -2.14
NUP98-218ENST00000530516 LHX2P50458 406 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 KCTD19Q17RG1 926 aaPredicted RBP1.67□□□□□ -2.14
NUP98-218ENST00000530516 DNAJC21Q5F1R6 531 aaKnown RBP1.67□□□□□ -2.14
NUP98-218ENST00000530516 ATF7IP2Q5U623 682 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 OR8G2PQ6IF36 304 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 VPS36Q86VN1 386 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 H1FOOQ8IZA3 346 aaPredicted RBP1.67□□□□□ -2.14
NUP98-218ENST00000530516 CERS5Q8N5B7 392 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 FAM71E2Q8N5Q1 922 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 RNF148Q8N7C7 305 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 ZSCAN4Q8NAM6 433 aaPredicted RBP1.67□□□□□ -2.14
NUP98-218ENST00000530516 ZNF540Q8NDQ6 660 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 ANKRD20A12PQ8NF67 263 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 TMEM186Q96B77 213 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 CELF6Q96J87 481 aaKnown RBP1.67□□□□□ -2.14
NUP98-218ENST00000530516 CYP2S1Q96SQ9 504 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 FEM1AQ9BSK4 669 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 NARFLQ9H6Q4 476 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 RPAP3Q9H6T3 665 aaPredicted RBP1.67□□□□□ -2.14
NUP98-218ENST00000530516 B3GNT2Q9NY97 397 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 WRAP73Q9P2S5 460 aaPredicted RBP1.67□□□□□ -2.14
NUP98-218ENST00000530516 DCDC2Q9UHG0 476 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 CYTH4Q9UIA0 394 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 ZNF225Q9UK10 706 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 PSG11Q9UQ72 335 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 CCDC7Q96M83 1385 aa1.67□□□□□ -2.14
NUP98-218ENST00000530516 A6NDX4 124 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 CFAP73A6NFT4 308 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 FAM74A7A6NL05 159 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 PP2D1A8MPX8 630 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 DDX39AO00148 427 aaKnown RBP1.66□□□□□ -2.14
NUP98-218ENST00000530516 LGALS8O00214 317 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 STX11O75558 287 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 MMP1P03956 469 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 THRBP10828 461 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 PDHBP11177 359 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 RALAP11233 206 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 H2AFXP16104 143 aaPredicted RBP1.66□□□□□ -2.14
NUP98-218ENST00000530516 ATP5A1P25705 553 aaKnown RBP1.66□□□□□ -2.14
NUP98-218ENST00000530516 CYLC1P35663 651 aaPredicted RBP1.66□□□□□ -2.14
NUP98-218ENST00000530516 BDKRB1P46663 353 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 PAX5Q02548 391 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 EIF4EBP1Q13541 118 aaPredicted RBP1.66□□□□□ -2.14
NUP98-218ENST00000530516 CHI3L2Q15782 390 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 FAM74A3Q4VXF1 159 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 WDR74Q6RFH5 385 aaPredicted RBP1.66□□□□□ -2.14
NUP98-218ENST00000530516 ZFP2Q6ZN57 461 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 LANCL3Q6ZV70 420 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 ARMCX2Q7L311 632 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 EFCAB13Q8IY85 973 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 ZNF561Q8N587 486 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 Q8N9W7 124 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 ZNF740Q8NDX6 193 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 MDS2Q8NDY4 140 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 STKLD1Q8NE28 680 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 KIR2DL5BQ8NHK3 375 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 IL1F10Q8WWZ1 152 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 RNF185Q96GF1 192 aa1.66□□□□□ -2.14
NUP98-218ENST00000530516 TESK2Q96S53 571 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms