RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	PCDH17	O14917	1159 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	MFN2	O95140	757 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	GADD45G	O95257	159 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	AIFM1	O95831	613 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	ADA	P00813	363 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	RORA	P35398	523 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	CDK6	Q00534	326 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	DOC2B	Q14184	412 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	ZNF79	Q15937	498 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	NKAIN1	Q4KMZ8	207 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	ARMC4	Q5T2S8	1044 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	SLC48A1	Q6P1K1	146 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	AMER3	Q8N944	861 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	AQP11	Q8NBQ7	271 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	NEDD4L	Q96PU5	975 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	SLC35A5	Q9BS91	424 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	CNPPD1	Q9BV87	410 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	SH3BP4	Q9P0V3	963 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	ENTPD4	Q9Y227	616 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	ANGPT4	Q9Y264	503 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	CMAHP	Q9Y471	501 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	SNX8	Q9Y5X2	465 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	B3GALT1	Q9Y5Z6	326 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	ZNF780B	Q9Y6R6	833 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540		C9J4A7	227 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	TIAF1	O95411	115 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	LGI1	O95970	557 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	FH	P07954	510 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	CCNYL3	P0C7X3	344 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	IL7	P13232	177 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	RBMS1	P29558	406 aa	Known RBP	13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	RPS19	P39019	145 aa	Known RBP	13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	CRYBB2	P43320	205 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	OR1E2	P47887	323 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	HSD17B7	P56937	341 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	MRPS15	P82914	257 aa	Known RBP	13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	SHC2	P98077	582 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	PRAMEF17	Q5VTA0	474 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	C12orf73	Q69YU5	71 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	GALNT12	Q8IXK2	581 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	OR5T3	Q8NGG3	340 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	GPR151	Q8TDV0	419 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	TMEM80	Q96HE8	168 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	TGIF2	Q9GZN2	237 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	NRSN2	Q9GZP1	204 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	SLC22A4	Q9H015	551 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	NMNAT1	Q9HAN9	279 aa	Predicted RBP	13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	NDUFB11	Q9NX14	153 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	HCN3	Q9P1Z3	774 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	TRPC4	Q9UBN4	977 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	MMACHC	Q9Y4U1	282 aa		13.53	□□□□□ -0.24
NR1H3-231	ENST00000529540	IGLV3-12	A0A075B6K2	115 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	MEIOC	A2RUB1	952 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540		J3KTA2	159 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	AGRP	O00253	132 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	CYR61	O00622	381 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	AP3D1	O14617	1153 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	STK17B	O94768	372 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	TNFSF15	O95150	251 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	RECK	O95980	971 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	ALPP	P05187	535 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	NTS	P30990	170 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	ETV5	P41161	510 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	OR1D4	P47884	311 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	CLDN6	P56747	220 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	HBA1	P69905	142 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	CHRNE	Q04844	493 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	MLLT11	Q13015	90 aa	Predicted RBP	13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	TBRG1	Q3YBR2	411 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	GLYR1	Q49A26	553 aa	Predicted RBP	13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	ZNF385C	Q66K41	422 aa	Predicted RBP	13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	RDH10	Q8IZV5	341 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	PSD4	Q8NDX1	1056 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	OR4K14	Q8NGD5	310 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	SLC7A6	Q92536	515 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	GTPBP3	Q969Y2	492 aa	Known RBP	13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	PEX11G	Q96HA9	241 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	PELO	Q9BRX2	385 aa	Known RBP	13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	MND1	Q9BWT6	205 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	SLC26A1	Q9H2B4	701 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	WDR54	Q9H977	334 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	SLC35C2	Q9NQQ7	365 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	ACSS1	Q9NUB1	689 aa	Predicted RBP	13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	GPN3	Q9UHW5	284 aa	Predicted RBP	13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	MAU2	Q9Y6X3	613 aa		13.52	□□□□□ -0.25
NR1H3-231	ENST00000529540	PDPK1	O15530	556 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	ENTPD6	O75354	484 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	ALX3	O95076	343 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	C6orf47	O95873	294 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	GAST	P01350	101 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	IL1A	P01583	271 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	YES1	P07947	543 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	OSM	P13725	252 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	MPI	P34949	423 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	PLA2G5	P39877	138 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	GABRE	P78334	506 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms