RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 TOR1AIP2Q8NFQ8 470 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 OR4C3Q8NH37 302 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 ZBTB8AQ96BR9 441 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 COQ8BQ96D53 544 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 ZNF845Q96IR2 970 aaPredicted RBP8.2□□□□□ -1.1
CMTM1-210ENST00000528441 OR52E6Q96RD3 313 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 GPATCH1Q9BRR8 931 aaKnown RBP8.2□□□□□ -1.1
CMTM1-210ENST00000528441 RTN4RQ9BZR6 473 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 C20orf27Q9GZN8 174 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 PIGMQ9H3S5 423 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 WDR55Q9H6Y2 383 aaPredicted RBP8.2□□□□□ -1.1
CMTM1-210ENST00000528441 MEAF6Q9HAF1 191 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 FANCFQ9NPI8 374 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 MED17Q9NVC6 651 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 FBXO34Q9NWN3 711 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 ASIC5Q9NY37 505 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 CRIM1Q9NZV1 1036 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 PACSIN3Q9UKS6 424 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 EDARQ9UNE0 448 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 PROCRQ9UNN8 238 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 CARD8Q9Y2G2 431 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 EMC9Q9Y3B6 208 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 MRPS18CQ9Y3D5 142 aaKnown RBP8.2□□□□□ -1.1
CMTM1-210ENST00000528441 AP4B1Q9Y6B7 739 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 NUP214P35658 2090 aaPredicted RBP8.2□□□□□ -1.1
CMTM1-210ENST00000528441 DOCK7Q96N67 2140 aa8.2□□□□□ -1.1
CMTM1-210ENST00000528441 KIAA1549Q9HCM3 1950 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 PRSS51A0A1B0GVH4 220 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 H0YC42 278 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 SDHDO14521 159 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 TNFSF11O14788 317 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 TNFRSF21O75509 655 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 STX11O75558 287 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 RCBTB2O95199 551 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 TGM6O95932 706 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 IL18BPO95998 194 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 CSTAP01040 98 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 UBTFL6P0CB48 400 aaPredicted RBP8.19□□□□□ -1.1
CMTM1-210ENST00000528441 POU2F1P14859 743 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 ZNF17P17021 662 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 P2RX1P51575 399 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 ATP12AP54707 1039 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 TPD52P55327 224 aaPredicted RBP8.19□□□□□ -1.1
CMTM1-210ENST00000528441 CLDN20P56880 219 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 WDR4P57081 412 aaKnown RBP8.19□□□□□ -1.1
CMTM1-210ENST00000528441 UFM1P61960 85 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 TFF3Q07654 80 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 FOXF1Q12946 379 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 FOXF2Q12947 444 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 CBFBQ13951 182 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 MPP2Q14168 576 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 BCL2A1Q16548 175 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 NDUFAF6Q330K2 333 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 GLYR1Q49A26 553 aaPredicted RBP8.19□□□□□ -1.1
CMTM1-210ENST00000528441 C6orf10Q5SRN2 563 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 PDZK1Q5T2W1 519 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 AGBL2Q5U5Z8 902 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 HBMQ6B0K9 141 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 ALKBH2Q6NS38 261 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 APOOLQ6UXV4 268 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 ZNF295-AS1Q8N0V1 137 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 LINC01560Q8TB33 94 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 FNDC9Q8TBE3 224 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 RAB3IL1Q8TBN0 382 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 PNPT1Q8TCS8 783 aaKnown RBP8.19□□□□□ -1.1
CMTM1-210ENST00000528441 FIG4Q92562 907 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 RAB8BQ92930 207 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 ZC3HAV1LQ96H79 300 aaKnown RBP8.19□□□□□ -1.1
CMTM1-210ENST00000528441 CLEC4MQ9H2X3 399 aaPredicted RBP8.19□□□□□ -1.1
CMTM1-210ENST00000528441 RMND5AQ9H871 391 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 TIGARQ9NQ88 270 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 AIG1Q9NVV5 245 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 PAQR5Q9NXK6 330 aaPredicted RBP8.19□□□□□ -1.1
CMTM1-210ENST00000528441 NTMQ9P121 344 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 CLCF1Q9UBD9 225 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 NDRG3Q9UGV2 375 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 MKLN1Q9UL63 735 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 CLEC4AQ9UMR7 237 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 L3MBTL1Q9Y468 752 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 WDR45Q9Y484 360 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 DTNAQ9Y4J8 743 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 KCNE3Q9Y6H6 103 aa8.19□□□□□ -1.1
CMTM1-210ENST00000528441 NOTCH2Q04721 2471 aa8.18□□□□□ -1.1
CMTM1-210ENST00000528441 A0A1W2PNV4 684 aa8.18□□□□□ -1.1
CMTM1-210ENST00000528441 A0A1W2PQD3 144 aa8.18□□□□□ -1.1
CMTM1-210ENST00000528441 SYT5O00445 386 aa8.18□□□□□ -1.1
CMTM1-210ENST00000528441 RFXANKO14593 260 aa8.18□□□□□ -1.1
CMTM1-210ENST00000528441 UBDO15205 165 aa8.18□□□□□ -1.1
CMTM1-210ENST00000528441 ZNF264O43296 627 aa8.18□□□□□ -1.1
CMTM1-210ENST00000528441 CXCL13O43927 109 aa8.18□□□□□ -1.1
CMTM1-210ENST00000528441 SLC22A3O75751 556 aa8.18□□□□□ -1.1
CMTM1-210ENST00000528441 KRT75O95678 551 aa8.18□□□□□ -1.1
CMTM1-210ENST00000528441 GSNP06396 782 aa8.18□□□□□ -1.1
CMTM1-210ENST00000528441 PGRP06401 933 aa8.18□□□□□ -1.1
CMTM1-210ENST00000528441 NGFRP08138 427 aa8.18□□□□□ -1.1
CMTM1-210ENST00000528441 NR2F1P10589 423 aa8.18□□□□□ -1.1
CMTM1-210ENST00000528441 TFPIP10646 304 aa8.18□□□□□ -1.1
CMTM1-210ENST00000528441 IDO1P14902 403 aa8.18□□□□□ -1.1
CMTM1-210ENST00000528441 RYKP34925 604 aa8.18□□□□□ -1.1
CMTM1-210ENST00000528441 EIF1P41567 113 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms