RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 RPA4Q13156 261 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 C4orf46Q504U0 113 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 ZNF782Q6ZMW2 699 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-208ENST00000527323 BEST4Q8NFU0 473 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 DIO2Q92813 273 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 KAT2AQ92830 837 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 OR7D2Q96RA2 312 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 S1PR5Q9H228 398 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 CLEC4MQ9H2X3 399 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-208ENST00000527323 XKR8Q9H6D3 395 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 GPR34Q9UPC5 381 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 A0A1W2PS29 197 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 C2CD4DB7Z1M9 353 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 IGHA1P01876 353 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 TCRBP04435 133 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 RPN2P04844 631 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 PRKACBP22694 351 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 F8A1P23610 371 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 PRR5P85299 388 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 MLC1Q15049 377 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 ZSWIM7Q19AV6 140 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 LYPD4Q6UWN0 246 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 ZNF793Q6ZN11 406 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 TMEM99Q8N816 258 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 NUP43Q8NFH3 380 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 OR5W2Q8NH69 310 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 TRMT10AQ8TBZ6 339 aaKnown RBP11.65□□□□□ -0.54
CAPN1-208ENST00000527323 C12orf66Q96MD2 445 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 CACNG6Q9BXT2 260 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.65□□□□□ -0.54
CAPN1-208ENST00000527323 OR51V1Q9H2C8 321 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 CACYBPQ9HB71 228 aaKnown RBP11.65□□□□□ -0.54
CAPN1-208ENST00000527323 NKIRAS2Q9NYR9 191 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 IL20Q9NYY1 176 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 DPP7Q9UHL4 492 aa11.65□□□□□ -0.54
CAPN1-208ENST00000527323 MAN2B1O00754 1011 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 LATO43561 262 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 SSNA1O43805 119 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 FZD7O75084 574 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 PRNPP04156 253 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 CXCL3P19876 107 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 FPR3P25089 353 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 ZNF81P51508 661 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 CLCNKAP51800 687 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 ACSM1Q08AH1 577 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 OAFQ86UD1 273 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 SPERTQ8NA61 448 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 OR11H4Q8NGC9 324 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 OR56A1Q8NGH5 318 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 SLC41A3Q96GZ6 507 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 LINC00615Q96LM1 132 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-208ENST00000527323 FERD3LQ96RJ6 166 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 ZNF649Q9BS31 505 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 SPRTNQ9H040 489 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-208ENST00000527323 PCBD2Q9H0N5 130 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 SLC38A1Q9H2H9 487 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 TRIM36Q9NQ86 728 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 WASH6PQ9NQA3 447 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 MRPL39Q9NYK5 338 aaKnown RBP11.64□□□□□ -0.55
CAPN1-208ENST00000527323 NLGN3Q9NZ94 848 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 ADAM29Q9UKF5 820 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 MAFFQ9ULX9 164 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 ATG4BQ9Y4P1 393 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 CACNA1IQ9P0X4 2223 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 A0A1W2PPK0 400 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 B8ZZF3 427 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 FCMRO60667 390 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 RAF1P04049 648 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 MRPL3P09001 348 aaKnown RBP11.64□□□□□ -0.55
CAPN1-208ENST00000527323 CSNK2A2P19784 350 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-208ENST00000527323 ACVR1BP36896 505 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 MC3RP41968 323 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 DUSP2Q05923 314 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 TJAP1Q5JTD0 557 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 C18orf63Q68DL7 685 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 MTFR2Q6P444 385 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 SFXN4Q6P4A7 337 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 ZNF620Q6ZNG0 422 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 IDO2Q6ZQW0 420 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 GDF7Q7Z4P5 450 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 OR5K2Q8NHB8 316 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 COL26A1Q96A83 441 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 ARRDC3Q96B67 414 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 CNRIP1Q96F85 164 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-208ENST00000527323 GPR137Q96N19 417 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 UBL7Q96S82 380 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-208ENST00000527323 UBQLN3Q9H347 655 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 EMC7Q9NPA0 242 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 C2orf42Q9NWW7 574 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 EIF3KQ9UBQ5 218 aaKnown RBP11.64□□□□□ -0.55
CAPN1-208ENST00000527323 ELF5Q9UKW6 265 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-208ENST00000527323 CHST2Q9Y4C5 530 aa11.64□□□□□ -0.55
CAPN1-208ENST00000527323 A0A0A6YYD5 115 aa11.63□□□□□ -0.55
CAPN1-208ENST00000527323 A0A1W2PR48 441 aa11.63□□□□□ -0.55
CAPN1-208ENST00000527323 LRIT2A6NDA9 550 aa11.63□□□□□ -0.55
CAPN1-208ENST00000527323 SLC9B1P1A6NJY1 282 aa11.63□□□□□ -0.55
CAPN1-208ENST00000527323 J3QLW9 94 aa11.63□□□□□ -0.55
CAPN1-208ENST00000527323 SYT5O00445 386 aa11.63□□□□□ -0.55
CAPN1-208ENST00000527323 SHOXO15266 292 aa11.63□□□□□ -0.55
CAPN1-208ENST00000527323 VEGFDO43915 354 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms