RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 FAM183AA6NL82 134 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 J3QLW9 94 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 RFXAPO00287 272 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 HOXA2O43364 376 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 TXNL1O43396 289 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 SMAD6O43541 496 aaKnown RBP4.4□□□□□ -1.7
HIPK3-204ENST00000525975 GALR3O60755 368 aaPredicted RBP4.4□□□□□ -1.7
HIPK3-204ENST00000525975 CLDN11O75508 207 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 HTR3BO95264 441 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 SNAPINO95295 136 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 NFATC1O95644 943 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 KLK1P06870 262 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 ACAA1P09110 424 aaPredicted RBP4.4□□□□□ -1.7
HIPK3-204ENST00000525975 UCHL1P09936 223 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 GAAP10253 952 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 SAGP10523 405 aaPredicted RBP4.4□□□□□ -1.7
HIPK3-204ENST00000525975 CPN1P15169 458 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 GNSP15586 552 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 ZNF19P17023 458 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 ZNF8P17098 575 aaPredicted RBP4.4□□□□□ -1.7
HIPK3-204ENST00000525975 CNR1P21554 472 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 PSMA3P25788 255 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 FAUP35544 74 aaKnown RBP4.4□□□□□ -1.7
HIPK3-204ENST00000525975 AHRP35869 848 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 SNRPEP62304 92 aaKnown RBP4.4□□□□□ -1.7
HIPK3-204ENST00000525975 RAE1P78406 368 aaKnown RBP4.4□□□□□ -1.7
HIPK3-204ENST00000525975 SHC2P98077 582 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 PDZK1IP1Q13113 114 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 SNTB1Q13884 538 aaKnown RBP4.4□□□□□ -1.7
HIPK3-204ENST00000525975 TRAM1Q15629 374 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 SMAD2Q15796 467 aaKnown RBP4.4□□□□□ -1.7
HIPK3-204ENST00000525975 ZNF697Q5TEC3 545 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 C9orf131Q5VYM1 1079 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 GRHL2Q6ISB3 625 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 HEPHL1Q6MZM0 1159 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 FAAP20Q6NZ36 180 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 FAM122BQ7Z309 247 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 CMIPQ8IY22 773 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 PUSL1Q8N0Z8 303 aaKnown RBP4.4□□□□□ -1.7
HIPK3-204ENST00000525975 ZSCAN1Q8NBB4 408 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 POGLUT1Q8NBL1 392 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 OR52B4Q8NGK2 314 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 OR14A16Q8NHC5 309 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 GOT1L1Q8NHS2 421 aaPredicted RBP4.4□□□□□ -1.7
HIPK3-204ENST00000525975 PIGXQ8TBF5 258 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 SMAP2Q8WU79 429 aaPredicted RBP4.4□□□□□ -1.7
HIPK3-204ENST00000525975 FAM46AQ96IP4 442 aaKnown RBP4.4□□□□□ -1.7
HIPK3-204ENST00000525975 SEPT5Q99719 369 aaPredicted RBP4.4□□□□□ -1.7
HIPK3-204ENST00000525975 TCEAL7Q9BRU2 100 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 IER2Q9BTL4 223 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 ADAT1Q9BUB4 502 aaKnown RBP4.4□□□□□ -1.7
HIPK3-204ENST00000525975 PTDSS2Q9BVG9 487 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 SLC38A1Q9H2H9 487 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 PIGMQ9H3S5 423 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 TREM1Q9NP99 234 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 ZDHHC3Q9NYG2 299 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 TAS2R5Q9NYW4 299 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 MARK1Q9P0L2 795 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 ABRACLQ9P1F3 81 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 MIOXQ9UGB7 285 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 TINAGQ9UJW2 476 aa4.4□□□□□ -1.7
HIPK3-204ENST00000525975 SYNDIG1LA6NDD5 238 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 OR6C68A6NDL8 312 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 C1orf196B1AJZ1 125 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 KDM4EB2RXH2 506 aaPredicted RBP4.4□□□□□ -1.71
HIPK3-204ENST00000525975 SOCS6O14544 535 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 ATP1B1P05026 303 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 CRYBA1P05813 215 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 IL3P08700 152 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 FURINP09958 794 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 ACHEP22303 614 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 CALCRP30988 508 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 THBS2P35442 1172 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 CAPZA1P52907 286 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 ART1P52961 327 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 GAS1P54826 345 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 ZNF280AP59817 542 aaPredicted RBP4.4□□□□□ -1.71
HIPK3-204ENST00000525975 PFN3P60673 137 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 SSTP61278 116 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 SIM1P81133 766 aaPredicted RBP4.4□□□□□ -1.71
HIPK3-204ENST00000525975 LSM11P83369 360 aaKnown RBP eCLIP4.4□□□□□ -1.71
HIPK3-204ENST00000525975 C4orf46Q504U0 113 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 ACSM3Q53FZ2 586 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 IER5LQ5T953 404 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 ZDHHC20Q5W0Z9 365 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 ZNF626Q68DY1 528 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 H3F3CQ6NXT2 135 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 LDLRAD3Q86YD5 345 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 CPOQ8IVL8 374 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 SLC44A3Q8N4M1 653 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 ZNF433Q8N7K0 673 aaPredicted RBP4.4□□□□□ -1.71
HIPK3-204ENST00000525975 BBS1Q8NFJ9 593 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 OR5D16Q8NGK9 328 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 OR52I2Q8NH67 350 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 ABHD4Q8TB40 342 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 LGALS14Q8TCE9 139 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 BRIX1Q8TDN6 353 aaKnown RBP4.4□□□□□ -1.71
HIPK3-204ENST00000525975 C16orf78Q8WTQ4 265 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 GLYATL2Q8WU03 294 aa4.4□□□□□ -1.71
HIPK3-204ENST00000525975 ASB11Q8WXH4 323 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms