RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 LILRB4Q8NHJ6 448 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 PNPT1Q8TCS8 783 aaKnown RBP11.71□□□□□ -0.53
CTSB-209ENST00000525315 ASB5Q8WWX0 329 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 KLHDC3Q9BQ90 382 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 LAT2Q9GZY6 243 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 SLC38A1Q9H2H9 487 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 MTHFD2LQ9H903 347 aaPredicted RBP11.71□□□□□ -0.53
CTSB-209ENST00000525315 COQ3Q9NZJ6 369 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 SLAMF8Q9P0V8 285 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 RNF6Q9Y252 685 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 CARD8Q9Y2G2 431 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 WDR45Q9Y484 360 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 CRYBG3Q68DQ2 2970 aa11.71□□□□□ -0.54
CTSB-209ENST00000525315 TRBV5-3A0A0A0MS03 114 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 A0A0G2JNJ9 132 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 CENPVL1A0A0U1RR11 272 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 C7orf72A4D263 438 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 CD8B2A6NJW9 211 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 KDM4EB2RXH2 506 aaPredicted RBP11.7□□□□□ -0.54
CTSB-209ENST00000525315 GTPBP1O00178 669 aaKnown RBP11.7□□□□□ -0.54
CTSB-209ENST00000525315 CLIC1O00299 241 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 NR5A2O00482 541 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 ZNF264O43296 627 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 OIP5O43482 229 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 HCRTR2O43614 444 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 TOXO94900 526 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 H6PDO95479 791 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 TFPTP0C1Z6 253 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 LINGO3P0C6S8 592 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 ETFAP13804 333 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 PSMA4P25789 261 aaKnown RBP11.7□□□□□ -0.54
CTSB-209ENST00000525315 CHRNB4P30926 498 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 CEACAM8P31997 349 aaPredicted RBP11.7□□□□□ -0.54
CTSB-209ENST00000525315 SUMO3P55854 103 aaPredicted RBP11.7□□□□□ -0.54
CTSB-209ENST00000525315 CLDN15P56746 228 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 CHRNEQ04844 493 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 FGFBP1Q14512 234 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 RGNQ15493 299 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 PLPPR5Q32ZL2 321 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 GPAT3Q53EU6 434 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 DLEU7Q6UYE1 221 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 DNAJC14Q6Y2X3 702 aaPredicted RBP11.7□□□□□ -0.54
CTSB-209ENST00000525315 LACC1Q8IV20 430 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 MSRB3Q8IXL7 192 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 ZNF619Q8N2I2 560 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 GTPBP8Q8N3Z3 284 aaPredicted RBP11.7□□□□□ -0.54
CTSB-209ENST00000525315 OR5M1Q8NGP8 315 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 OR10Q1Q8NGQ4 319 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 POC1BQ8TC44 478 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 GPR119Q8TDV5 335 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 ZBTB8AQ96BR9 441 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 SDCCAG3Q96C92 435 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 ARSGQ96EG1 525 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 AURKBQ96GD4 344 aaPredicted RBP11.7□□□□□ -0.54
CTSB-209ENST00000525315 SH3YL1Q96HL8 342 aaPredicted RBP11.7□□□□□ -0.54
CTSB-209ENST00000525315 TUBA1CQ9BQE3 449 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 MED17Q9NVC6 651 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 THUMPD1Q9NXG2 353 aaKnown RBP11.7□□□□□ -0.54
CTSB-209ENST00000525315 SLC25A37Q9NYZ2 338 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 KLHL14Q9P2G3 628 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 Q9UFV3 132 aa11.7□□□□□ -0.54
CTSB-209ENST00000525315 MBD3L4A6NDZ8 208 aaPredicted RBP11.69□□□□□ -0.54
CTSB-209ENST00000525315 MBD3L3A6NE82 208 aaPredicted RBP11.69□□□□□ -0.54
CTSB-209ENST00000525315 MBD3L5A6NJ08 208 aaPredicted RBP11.69□□□□□ -0.54
CTSB-209ENST00000525315 FAM47E-STBD1D6RA91 191 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 GMFGO60234 142 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 TNFRSF21O75509 655 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 CHRM4P08173 479 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 NR2F1P10589 423 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 BMP2P12643 396 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 ZNF17P17021 662 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 TCEA1P23193 301 aaKnown RBP11.69□□□□□ -0.54
CTSB-209ENST00000525315 HTR1EP28566 365 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 CRATP43155 626 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 SUCLG1P53597 346 aaKnown RBP11.69□□□□□ -0.54
CTSB-209ENST00000525315 DSTNP60981 165 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 SRYQ05066 204 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 RAET1LQ5VY80 246 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 SP5Q6BEB4 398 aaPredicted RBP11.69□□□□□ -0.54
CTSB-209ENST00000525315 CCDC71Q8IV32 467 aaPredicted RBP11.69□□□□□ -0.54
CTSB-209ENST00000525315 DPP10Q8N608 796 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 TOR1AIP2Q8NFQ8 470 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 MBD3L2Q8NHZ7 208 aaPredicted RBP11.69□□□□□ -0.54
CTSB-209ENST00000525315 SLC38A5Q8WUX1 472 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 ZNF524Q96C55 264 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 NPAS1Q99742 590 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 RAD21L1Q9H4I0 556 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 RUBCNLQ9H714 662 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.69□□□□□ -0.54
CTSB-209ENST00000525315 MRGBPQ9NV56 204 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 VAPAQ9P0L0 249 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 LEF1Q9UJU2 399 aaPredicted RBP11.69□□□□□ -0.54
CTSB-209ENST00000525315 VDAC3Q9Y277 283 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 L3MBTL1Q9Y468 752 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 AP4B1Q9Y6B7 739 aa11.69□□□□□ -0.54
CTSB-209ENST00000525315 CACNA1DQ01668 2161 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 CELSR2Q9HCU4 2923 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 AGAP5A6NIR3 686 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 HSPB2A8KAH6 182 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 SHISA8B8ZZ34 492 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms