RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 ATP4BP51164 291 aa18.86■□□□□ 0.61
TRAPPC9-215ENST00000524162 P2RX1P51575 399 aa18.86■□□□□ 0.61
TRAPPC9-215ENST00000524162 ZNF41P51814 821 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC9-215ENST00000524162 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.86■□□□□ 0.61
TRAPPC9-215ENST00000524162 ARSKQ6UWY0 536 aa18.86■□□□□ 0.61
TRAPPC9-215ENST00000524162 LIX1LQ8IVB5 337 aa18.86■□□□□ 0.61
TRAPPC9-215ENST00000524162 CLEC4FQ8N1N0 589 aa18.86■□□□□ 0.61
TRAPPC9-215ENST00000524162 NAXEQ8NCW5 288 aa18.86■□□□□ 0.61
TRAPPC9-215ENST00000524162 ROPN1LQ96C74 230 aa18.86■□□□□ 0.61
TRAPPC9-215ENST00000524162 ITCHQ96J02 903 aa18.86■□□□□ 0.61
TRAPPC9-215ENST00000524162 TRNT1Q96Q11 434 aaKnown RBP18.86■□□□□ 0.61
TRAPPC9-215ENST00000524162 MED17Q9NVC6 651 aa18.86■□□□□ 0.61
TRAPPC9-215ENST00000524162 PAQR5Q9NXK6 330 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC9-215ENST00000524162 PRDM4Q9UKN5 801 aa18.86■□□□□ 0.61
TRAPPC9-215ENST00000524162 ZNF175Q9Y473 711 aa18.86■□□□□ 0.61
TRAPPC9-215ENST00000524162 FBN2P35556 2912 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 HMGN4O00479 90 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 LINGO3P0C6S8 592 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 OR12D1P0DN82 309 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 ELK4P28324 431 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 ZNF136P52737 540 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 AQP5P55064 265 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 RAC1P63000 192 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 ZNF117Q03924 483 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 OR2A2Q6IF42 318 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 ZNF621Q6ZSS3 439 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 METTL25Q8N6Q8 603 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 PHOSPHO1Q8TCT1 267 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 ZFP90Q8TF47 636 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 XAGE5Q8WWM1 108 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 C14orf79Q96F83 325 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 LRRC46Q96FV0 321 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 INPP5KQ9BT40 448 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 SFXN3Q9BWM7 321 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 UCK2Q9BZX2 261 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 NPDC1Q9NQX5 325 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 ZNF446Q9NWS9 450 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 THUMPD1Q9NXG2 353 aaKnown RBP18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 GPC6Q9Y625 555 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 GMEB1Q9Y692 573 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 MPDZO75970 2070 aa18.85■□□□□ 0.61
TRAPPC9-215ENST00000524162 SERINC4A6NH21 518 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 FAM90A27PA6NNH2 459 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 SYT5O00445 386 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 ZNF264O43296 627 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 FCMRO60667 390 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 EDF1O60869 148 aaKnown RBP18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 UGT2B17O75795 530 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 CDKN2CP42773 168 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 PCYT1AP49585 367 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 CLDN15P56746 228 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 RPS3AP61247 264 aaKnown RBP18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 SRYQ05066 204 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 SLC25A53Q5H9E4 307 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 TYW3Q6IPR3 259 aaKnown RBP18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 TNFAIP8L2Q6P589 184 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 BLOC1S3Q6QNY0 202 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 CHMP1BQ7LBR1 199 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 RNF130Q86XS8 419 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 ARFGAP2Q8N6H7 521 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 FAM71CQ8NEG0 241 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 EBF4Q9BQW3 602 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 RABEP2Q9H5N1 569 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 JKAMPQ9P055 326 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 SLC35A3Q9Y2D2 325 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 WDR45Q9Y484 360 aa18.84■□□□□ 0.61
TRAPPC9-215ENST00000524162 NKX2-6A6NCS4 301 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 KDM4EB2RXH2 506 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 C9JVG2 144 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 GTPBP1O00178 669 aaKnown RBP18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 ADAMDEC1O15204 470 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 UBL4AP11441 157 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 ASCL1P50553 236 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 GPR68Q15743 365 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 CBLN3Q6UW01 205 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 LRRC74BQ6ZQY2 392 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 GDF7Q7Z4P5 450 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 DMRTC2Q8IXT2 367 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 ZNF619Q8N2I2 560 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 C9orf106Q8NAJ2 232 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 GATSQ8NAP1 163 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 OR9I1Q8NGQ6 314 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 OR5W2Q8NH69 310 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 GTF2H4Q92759 462 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 MARK4Q96L34 752 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 TRIM8Q9BZR9 551 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 LAT2Q9GZY6 243 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 KCNE5Q9UJ90 142 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 VDAC3Q9Y277 283 aa18.83■□□□□ 0.6
TRAPPC9-215ENST00000524162 NTN1O95631 604 aa18.82■□□□□ 0.6
TRAPPC9-215ENST00000524162 TMIGD3P0DMS9 266 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC9-215ENST00000524162 SSTR2P30874 369 aa18.82■□□□□ 0.6
TRAPPC9-215ENST00000524162 SUCLG1P53597 346 aaKnown RBP18.82■□□□□ 0.6
TRAPPC9-215ENST00000524162 MVDP53602 400 aa18.82■□□□□ 0.6
TRAPPC9-215ENST00000524162 DLX5P56178 289 aa18.82■□□□□ 0.6
TRAPPC9-215ENST00000524162 HPCAP84074 193 aa18.82■□□□□ 0.6
TRAPPC9-215ENST00000524162 FUT5Q11128 374 aa18.82■□□□□ 0.6
TRAPPC9-215ENST00000524162 SKP2Q13309 424 aa18.82■□□□□ 0.6
TRAPPC9-215ENST00000524162 FGFBP1Q14512 234 aa18.82■□□□□ 0.6
TRAPPC9-215ENST00000524162 PDZK1Q5T2W1 519 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms