RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 SLC38A5Q8WUX1 472 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 KCTD4Q8WVF5 259 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 ANKRD49Q8WVL7 239 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 LCN9Q8WX39 176 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 TM9SF4Q92544 642 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 PTERQ96BW5 349 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 NXNL1Q96CM4 212 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 PGAM5Q96HS1 289 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 CABS1Q96KC9 395 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 CCDC3Q9BQI4 270 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 HGH1Q9BTY7 390 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 RAB11FIP5Q9BXF6 653 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 TBC1D10AQ9BXI6 508 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 RAB33BQ9H082 229 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 ABCG4Q9H172 646 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 LRMDAQ9H2I8 198 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 SRMSQ9H3Y6 488 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 XKR8Q9H6D3 395 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 MAGIXQ9H6Y5 334 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 SEBOXQ9HB31 216 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-209ENST00000521559 RDH14Q9HBH5 336 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 ARGLU1Q9NWB6 273 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-209ENST00000521559 HRASLS2Q9NWW9 162 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 NKIRAS2Q9NYR9 191 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 OR6C2Q9NZP2 312 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 OGFRQ9NZT2 677 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 SPATA7Q9P0W8 599 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 PSMC3IPQ9P2W1 217 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-209ENST00000521559 COPG2Q9UBF2 871 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 EPHA6Q9UF33 1036 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 DCDC2Q9UHG0 476 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 LGALS13Q9UHV8 139 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 RPS6KA6Q9UK32 745 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 IKZF3Q9UKT9 509 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 PDE10AQ9Y233 779 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 TDRKHQ9Y2W6 561 aaKnown RBP2.93□□□□□ -1.94
VPS13B-209ENST00000521559 NCOR1O75376 2440 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 UNC80Q8N2C7 3258 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 EYSQ5T1H1 3165 aa2.93□□□□□ -1.94
VPS13B-209ENST00000521559 ATG2BQ96BY7 2078 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 ABCA7Q8IZY2 2146 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 UQCRHLA0A096LP55 91 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 IGHV5-10-1A0A0J9YXX1 117 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 A0A1W2PPV9 198 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 C1orf226A1L170 272 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 OR5K3A6NET4 321 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 C15orf62A8K5M9 175 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 SYCE1LA8MT33 242 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 C2orf74A8MZ97 194 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 SMIM1B2RUZ4 78 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 GOLGA8RI6L899 631 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 BTN3A3O00478 584 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 MAP2K7O14733 419 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 ANKRD28O15084 1053 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 TOX3O15405 576 aaPredicted RBP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 RGS16O15492 202 aaPredicted RBP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 TAPBPO15533 448 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 DUX1O43812 170 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 PRKNO60260 465 aaPredicted RBP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 KERAO60938 352 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 GLRA3O75311 464 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 KLHL2O95198 593 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 CPNE6O95741 557 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 SLC16A8O95907 504 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 C9P02748 559 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 RPLP0P05388 317 aaKnown RBP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 UQCRHP07919 91 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 GSTA1P08263 222 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 ANXA5P08758 320 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 ERGP11308 486 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 CD1DP15813 335 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 OAS2P29728 719 aaKnown RBP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 PRDX3P30048 256 aaKnown RBP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 HNMTP50135 292 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 RAB28P51157 221 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 KPNA2P52292 529 aaKnown RBP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 CLDN20P56880 219 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 RELAQ04206 551 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 PRKAA1Q13131 559 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 TRA2AQ13595 282 aaKnown RBP eCLIP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 FASTKQ14296 549 aaKnown RBP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 IRF3Q14653 427 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 KIR2DS3Q14952 304 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 TGFBIQ15582 683 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 OR4D1Q15615 310 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 TSNQ15631 228 aaKnown RBP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 PHKG1Q16816 387 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 PPP1R3AQ16821 1122 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 SLC5A12Q1EHB4 618 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 ISXQ2M1V0 245 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 KRT71Q3SY84 523 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 CDONQ4KMG0 1287 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 TNFAIP8L3Q5GJ75 292 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 TECRLQ5HYJ1 363 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 N4BP2L1Q5TBK1 243 aaPredicted RBP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 HES3Q5TGS1 186 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 HIST2H2BCQ6DN03 193 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 HIST2H2BDQ6DRA6 164 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 SULT1C3Q6IMI6 304 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 CAPN13Q6MZZ7 669 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms