RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 IL6P05231 212 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 CEACAM8P31997 349 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-221ENST00000520265 SFTPDP35247 375 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 CPOXP36551 454 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 POLR2JP52435 117 aaKnown RBP12.79□□□□□ -0.36
VEGFA-221ENST00000520265 AQP5P55064 265 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 CLDN20P56880 219 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 TLE4Q04727 773 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 LRRC74AQ0VAA2 488 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 FOXF1Q12946 379 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 PLPPR5Q32ZL2 321 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 EXOSC6Q5RKV6 272 aaKnown RBP12.79□□□□□ -0.36
VEGFA-221ENST00000520265 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.79□□□□□ -0.361e-7■□□□□ 10.9
VEGFA-221ENST00000520265 SAXO2Q658L1 398 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 MTERF4Q7Z6M4 381 aaKnown RBP12.79□□□□□ -0.36
VEGFA-221ENST00000520265 TMEM200AQ86VY9 491 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 WNT2BQ93097 391 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 ZBTB8AQ96BR9 441 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 NEURL3Q96EH8 262 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 MAELQ96JY0 434 aaKnown RBP12.79□□□□□ -0.36
VEGFA-221ENST00000520265 SPOCK3Q9BQ16 436 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 ZNF559Q9BR84 538 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 ZIM2Q9NZV7 527 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 ZNF629Q9UEG4 869 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-221ENST00000520265 AP4B1Q9Y6B7 739 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 ZNF264O43296 627 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 OIP5O43482 229 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 FCMRO60667 390 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 SCN2BO60939 215 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 SASH3O75995 380 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 SYNGR4O95473 234 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 KRT75O95678 551 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 PLGP00747 810 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-221ENST00000520265 CSTAP01040 98 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 UBTFL6P0CB48 400 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-221ENST00000520265 NR2F1P10589 423 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 ZNF17P17021 662 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 SSTR2P30874 369 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 IDH3AP50213 366 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 P2RX1P51575 399 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 SUCLG1P53597 346 aaKnown RBP12.78□□□□□ -0.36
VEGFA-221ENST00000520265 CLDN15P56746 228 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 TFF3Q07654 80 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 FOXF2Q12947 444 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 PON3Q15166 354 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 BCL2A1Q16548 175 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 ARHGAP11BQ3KRB8 267 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 GLYR1Q49A26 553 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-221ENST00000520265 FBXW10Q5XX13 1052 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 POMZP3Q6PJE2 187 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 CBLN3Q6UW01 205 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 EPGNQ6UW88 154 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 TOR1AIP2Q8NFQ8 470 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 FIG4Q92562 907 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 VPS33AQ96AX1 596 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 ROPN1LQ96C74 230 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 ARSGQ96EG1 525 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 ZNF845Q96IR2 970 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-221ENST00000520265 ITCHQ96J02 903 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 EBF4Q9BQW3 602 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 SFXN3Q9BWM7 321 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 TRIM8Q9BZR9 551 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 CACYBPQ9HB71 228 aaKnown RBP12.78□□□□□ -0.36
VEGFA-221ENST00000520265 CLCF1Q9UBD9 225 aa12.78□□□□□ -0.36
VEGFA-221ENST00000520265 INTS1Q8N201 2190 aaKnown RBP12.78□□□□□ -0.36
VEGFA-221ENST00000520265 UNC79Q9P2D8 2635 aa12.77□□□□□ -0.36
VEGFA-221ENST00000520265 PKDREJQ9NTG1 2253 aa12.77□□□□□ -0.36
VEGFA-221ENST00000520265 CENPVL1A0A0U1RR11 272 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 SERINC4A6NH21 518 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 ZNF195O14628 629 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 TNFSF11O14788 317 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 TGDSO95455 350 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 TGM6O95932 706 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 C1QCP02747 245 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 CRATP43155 626 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 CBFBQ13951 182 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 KLHL26Q53HC5 615 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 PDSS1Q5T2R2 415 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 OR2A2Q6IF42 318 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 DMRTC2Q8IXT2 367 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-221ENST00000520265 ZZZ3Q8IYH5 903 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 ZNF619Q8N2I2 560 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 GTPBP8Q8N3Z3 284 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-221ENST00000520265 CHDHQ8NE62 594 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-221ENST00000520265 ZNF563Q8TA94 476 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 FNDC9Q8TBE3 224 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 CKAP2Q8WWK9 683 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 RNASE6Q93091 150 aaKnown RBP12.77□□□□□ -0.37
VEGFA-221ENST00000520265 MAGEB18Q96M61 343 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 ZFP3Q96NJ6 502 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 NPAS1Q99742 590 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 KLHDC3Q9BQ90 382 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 NMUR2Q9GZQ4 415 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 ZNF350Q9GZX5 532 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 ENKD1Q9H0I2 346 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 NPHS2Q9NP85 383 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 SDR39U1Q9NRG7 319 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-221ENST00000520265 DCTN4Q9UJW0 460 aa12.77□□□□□ -0.37
VEGFA-221ENST00000520265 MCTS1Q9ULC4 181 aaKnown RBP12.77□□□□□ -0.37
VEGFA-221ENST00000520265 HCFC1P51610 2035 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms