RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 FGF18O76093 207 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 MFN2O95140 757 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 ZBED1O96006 694 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 IGKV1D-12P01611 117 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 IGHV2-70P01814 119 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 IGLV7-43P04211 117 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 CD59P13987 128 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 IMPDH1P20839 514 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 SLC26A3P40879 764 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 SERPINB8P50452 374 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 HMGCS1Q01581 520 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 PLOD1Q02809 727 aaPredicted RBP-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 UBXN1Q04323 297 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 NIPAL4Q0D2K0 466 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 MRPL28Q13084 256 aaKnown RBP-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 KRT32Q14532 448 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 CASP8Q14790 479 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 MAD2L1BPQ15013 274 aaPredicted RBP-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 CEBPEQ15744 281 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 ZNF77Q15935 545 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 SLC9B1Q4ZJI4 515 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 DDX59Q5T1V6 619 aaKnown RBP eCLIP-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 LGSNQ5TDP6 509 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 LGALS9CQ6DKI2 356 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 SLC30A6Q6NXT4 461 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 TMEM184AQ6ZMB5 413 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 MOB2Q70IA6 237 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 ZNF767PQ75MW2 155 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 VRK2Q86Y07 508 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 MFSD6LQ8IWD5 586 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 SKA3Q8IX90 412 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 LINC01561Q8N1V8 128 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 CSNK1A1LQ8N752 337 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 OR2A12Q8NGT7 310 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 COQ8AQ8NI60 647 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 PATE1Q8WXA2 126 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 RORBQ92753 470 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 KIAA1191Q96A73 305 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 MOAP1Q96BY2 351 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 BIRC7Q96CA5 298 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 RBM41Q96IZ5 413 aaKnown RBP-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 NAP1L3Q99457 506 aaPredicted RBP-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 TRIM7Q9C029 511 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 SLKQ9H2G2 1235 aaPredicted RBP-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 RIMS4Q9H426 269 aaPredicted RBP-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 LRRC19Q9H756 370 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 NOL11Q9H8H0 719 aaKnown RBP-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 BRF2Q9HAW0 419 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 PHPT1Q9NRX4 125 aaPredicted RBP-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 GPR34Q9UPC5 381 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 CBY1Q9Y3M2 126 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 HEBP2Q9Y5Z4 205 aa-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 MRPL42Q9Y6G3 142 aaKnown RBP-2.02□□□□□ -2.73
SNORA40.16-201ENST00000517238 BSNQ9UPA5 3926 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 CENPVL3A0A0U1RRI6 287 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 TTC26A0AVF1 554 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 CEACAM18A8MTB9 384 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 NCK2O43639 380 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 NDUFS3O75489 264 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 RSL1D1O76021 490 aaKnown RBP-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 CELF2O95319 508 aaKnown RBP-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 HLA-DQB1P01920 261 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 APRTP07741 180 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 UBTFL1P0CB47 393 aaPredicted RBP-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 GOLGA6DP0CG33 693 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 ACTN1P12814 892 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 UCP1P25874 307 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 LOXP28300 417 aaPredicted RBP-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 CPOXP36551 454 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 RPS6P62753 249 aaKnown RBP-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 KCNJ2P63252 427 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 SLC34A1Q06495 639 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 ASPHQ12797 758 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 KLF5Q13887 457 aaPredicted RBP-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 KRTAP25-1Q3LHN0 102 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 FAM174BQ3ZCQ3 159 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 ASB16-AS1Q495Z4 193 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 FAM209BQ5JX69 171 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 TAF3Q5VWG9 929 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 OR2A2Q6IF42 318 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 SULT6B1Q6IMI4 303 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 LYPD2Q6UXB3 125 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 STOX1Q6ZVD7 989 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 PIGWQ7Z7B1 504 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 PHLDB2Q86SQ0 1253 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 LILRB4Q8NHJ6 448 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 BRI3BPQ8WY22 251 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 SGCDQ92629 289 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 HAS2Q92819 552 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 DNAJC30Q96LL9 226 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 SFXN2Q96NB2 322 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 NDNQ99608 321 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 TBL1YQ9BQ87 522 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 HIGD2AQ9BW72 106 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 ASPSCR1Q9BZE9 553 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 SLC25A51Q9H1U9 297 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 AASDHPPTQ9NRN7 309 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 GIMAP4Q9NUV9 329 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 BABAM2Q9NXR7 383 aa-2.03□□□□□ -2.73
SNORA40.16-201ENST00000517238 PCYOX1Q9UHG3 505 aa-2.03□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms