RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 TO15178 435 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PEX1O43933 1283 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 HS6ST1O60243 411 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 UGT2B11O75310 529 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SOX30O94993 753 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 NKX2-2O95096 273 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 RASAL1O95294 804 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PSMG1O95456 288 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 OR12D1P0DN82 309 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CAPN3P20807 821 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 ATP6V1C1P21283 382 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CNR1P21554 472 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PEX2P28328 305 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 ADSLP30566 484 aaPredicted RBP5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PIGAP37287 484 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CRATP43155 626 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 MEOX1P50221 254 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 MAP2K6P52564 334 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PNLIPRP2P54317 469 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PSMD4P55036 377 aaKnown RBP5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 POU6F2P78424 691 aaPredicted RBP5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 MRPS22P82650 360 aaKnown RBP5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PLGLB1Q02325 96 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 STX5Q13190 355 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 NFYCQ13952 458 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CYLC2Q14093 348 aaPredicted RBP5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 EFR3AQ14156 821 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CNN3Q15417 329 aaKnown RBP5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 MAPRE2Q15555 327 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 NTRK2Q16620 822 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 DUSP5Q16690 384 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 ZNF791Q3KP31 576 aaPredicted RBP5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 GTDC1Q4AE62 458 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PAGE3Q5JUK9 113 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CCNJQ5T5M9 372 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 ATAD3BQ5T9A4 648 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 GKAP1Q5VSY0 366 aaPredicted RBP5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PRAMEF20Q5VT98 475 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CDC73Q6P1J9 531 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 TNFAIP8L2Q6P589 184 aaPredicted RBP5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 MSANTD1Q6ZTZ1 278 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PIGWQ7Z7B1 504 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 GALNT10Q86SR1 603 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SNX32Q86XE0 403 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 DND1Q8IYX4 353 aaKnown RBP5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 BCORP1Q8N888 145 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 Q8NA96 180 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PSD4Q8NDX1 1056 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 OR5D16Q8NGK9 328 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SPPL2AQ8TCT8 520 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 GTF2H4Q92759 462 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CDS1Q92903 461 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 RAB8BQ92930 207 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 NEURL3Q96EH8 262 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SCMH1Q96GD3 660 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 JSRP1Q96MG2 331 aaPredicted RBP5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 COL21A1Q96P44 957 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 BTBD9Q96Q07 612 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 NODALQ96S42 347 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 STACQ99469 402 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 TRIM4Q9C037 500 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 OR51I1Q9H343 314 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 PIGUQ9H490 435 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 ZNF385DQ9H6B1 395 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 METTL7AQ9H8H3 244 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 TPT1P8Q9HAU6 139 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 IL1RL2Q9HB29 575 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SERHLQ9NQF3 203 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SACM1LQ9NTJ5 587 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 EXD2Q9NVH0 621 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 KLRF1Q9NZS2 232 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CNIH4Q9P003 139 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 LEF1Q9UJU2 399 aaPredicted RBP5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 ARL2BPQ9Y2Y0 163 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 KLF13Q9Y2Y9 288 aaPredicted RBP5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 KCNE3Q9Y6H6 103 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 TEP1Q99973 2627 aaKnown RBP5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 ZNF462Q96JM2 2506 aa5.31□□□□□ -1.56
SCARNA6.1-201ENST00000516989 A0A096LPI6 279 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 EVPLLA8MZ36 301 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 NPIPA5E9PKD4 350 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CLIC1O00299 241 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 SUV39H1O43463 412 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 NME2P1O60361 137 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 TSPAN2O60636 221 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 KCNK2O95069 426 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 UNC5CO95185 931 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 FAM107AO95990 144 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 AGR2O95994 175 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CRYABP02511 175 aaKnown RBP5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 C1QCP02747 245 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 ZCCHC18P0CG32 403 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CCL3P10147 92 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CYP4B1P13584 511 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 HPGDP15428 266 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 RFC3P40938 356 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 MAP3K8P41279 467 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 CASP3P42574 277 aa5.3□□□□□ -1.56
SCARNA6.1-201ENST00000516989 DNASE1L1P49184 302 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms