RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 POLR2HP52434 150 aaKnown RBP12.53□□□□□ -0.4
TCOF1-214ENST00000515035 ZNF91Q05481 1191 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 GPR50Q13585 617 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 IL20RBQ6UXL0 311 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 LILRA2Q8N149 483 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 CREB3L4Q8TEY5 395 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 LURAP1Q96LR2 239 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 ST6GALNAC5Q9BVH7 336 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 SLC12A9Q9BXP2 914 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 OLAHQ9NV23 265 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 OSGIN1Q9UJX0 560 aa12.53□□□□□ -0.4
TCOF1-214ENST00000515035 A0A0D9SG52 128 aa12.52□□□□□ -0.4
TCOF1-214ENST00000515035 VSTM5A8MXK1 200 aa12.52□□□□□ -0.4
TCOF1-214ENST00000515035 FRS3O43559 492 aa12.52□□□□□ -0.4
TCOF1-214ENST00000515035 RNH1P13489 461 aaKnown RBP12.52□□□□□ -0.4
TCOF1-214ENST00000515035 EPHA1P21709 976 aa12.52□□□□□ -0.4
TCOF1-214ENST00000515035 RBMS1P29558 406 aaKnown RBP12.52□□□□□ -0.4
TCOF1-214ENST00000515035 CAV3P56539 151 aa12.52□□□□□ -0.4
TCOF1-214ENST00000515035 ZNF33BQ06732 778 aa12.52□□□□□ -0.4
TCOF1-214ENST00000515035 GRM2Q14416 872 aa12.52□□□□□ -0.4
TCOF1-214ENST00000515035 HYAL4Q2M3T9 481 aa12.52□□□□□ -0.4
TCOF1-214ENST00000515035 RFPL4BQ6ZWI9 263 aa12.52□□□□□ -0.4
TCOF1-214ENST00000515035 RCBTB1Q8NDN9 531 aa12.52□□□□□ -0.4
TCOF1-214ENST00000515035 ZBED3Q96IU2 234 aaPredicted RBP12.52□□□□□ -0.4
TCOF1-214ENST00000515035 CNTNAP3Q9BZ76 1288 aa12.52□□□□□ -0.4
TCOF1-214ENST00000515035 BABAM2Q9NXR7 383 aa12.52□□□□□ -0.4
TCOF1-214ENST00000515035 CXXC1Q9P0U4 656 aaPredicted RBP12.52□□□□□ -0.4
TCOF1-214ENST00000515035 FBXL2Q9UKC9 423 aa12.52□□□□□ -0.4
TCOF1-214ENST00000515035 CRYBG1Q9Y4K1 1723 aa12.52□□□□□ -0.4
TCOF1-214ENST00000515035 ARSBP15848 533 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 NFYAP23511 347 aaPredicted RBP12.52□□□□□ -0.41
TCOF1-214ENST00000515035 CPOXP36551 454 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 SF3B4Q15427 424 aaKnown RBP eCLIP12.52□□□□□ -0.416e-6■■□□□ 11.8
TCOF1-214ENST00000515035 MORN1Q5T089 497 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 C18orf63Q68DL7 685 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 RNF111Q6ZNA4 994 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 PGAP1Q75T13 922 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 SSX9Q7RTT3 188 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 MEX3DQ86XN8 651 aaKnown RBP12.52□□□□□ -0.41
TCOF1-214ENST00000515035 KLHDC8AQ8IYD2 350 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 OR1S1Q8NH92 325 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 DUSP19Q8WTR2 217 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 SGCZQ96LD1 299 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 NIPAL2Q9H841 368 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 SIAEQ9HAT2 523 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 SLC2A4RGQ9NR83 387 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 TESQ9UGI8 421 aaKnown RBP12.52□□□□□ -0.41
TCOF1-214ENST00000515035 K7EPK0 472 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 SRPX2O60687 465 aaPredicted RBP12.52□□□□□ -0.41
TCOF1-214ENST00000515035 HTR3BO95264 441 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 KLK3P07288 261 aaPredicted RBP12.52□□□□□ -0.41
TCOF1-214ENST00000515035 MANEALQ5VSG8 457 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 MEX3BQ6ZN04 569 aaKnown RBP12.52□□□□□ -0.41
TCOF1-214ENST00000515035 CMTM1Q8IZ96 169 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 FAM71E2Q8N5Q1 922 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 CD200R1Q8TD46 325 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 OR1F2PQ96R84 312 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 NAALAD2Q9Y3Q0 740 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 A6NLC8 198 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 TNFRSF10AO00220 468 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 RAB4AP20338 218 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 LMAN2Q12907 356 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 AVPI1Q5T686 147 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 TMEM164Q5U3C3 297 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 LYPD4Q6UWN0 246 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 CD163Q86VB7 1156 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 ZNF619Q8N2I2 560 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 OR7G3Q8NG95 312 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 C4orf36Q96KX1 117 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 NECTIN4Q96NY8 510 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 BACE2Q9Y5Z0 518 aa12.52□□□□□ -0.41
TCOF1-214ENST00000515035 ANKRD34BA5PLL1 514 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 RNASET2O00584 256 aaKnown RBP12.51□□□□□ -0.41
TCOF1-214ENST00000515035 MT-CO2P00403 227 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 SERPINE2P07093 398 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 BPIP17213 487 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 TAS2R19P59542 299 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 CCINQ13939 588 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 TCTE1Q5JU00 501 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 ZNF704Q6ZNC4 412 aaPredicted RBP12.51□□□□□ -0.41
TCOF1-214ENST00000515035 CREB3L2Q70SY1 520 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 CBLL1Q75N03 491 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 PDZD3Q86UT5 571 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 CCDC71Q8IV32 467 aaPredicted RBP12.51□□□□□ -0.41
TCOF1-214ENST00000515035 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.51□□□□□ -0.41
TCOF1-214ENST00000515035 SMG9Q9H0W8 520 aaKnown RBP12.51□□□□□ -0.41
TCOF1-214ENST00000515035 RHBDD3Q9Y3P4 386 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 IER3IP1Q9Y5U9 82 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 GGT3PA6NGU5 568 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 EIF3FO00303 357 aaPredicted RBP12.51□□□□□ -0.41
TCOF1-214ENST00000515035 ARHGAP33O14559 1287 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 RDH16O75452 317 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 ADH1BP00325 375 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 RHOP08100 348 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 TPMTP51580 245 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 PRPS1P60891 318 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 SCGB2A2Q13296 93 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 ERN2Q76MJ5 926 aaKnown RBP12.51□□□□□ -0.41
TCOF1-214ENST00000515035 DPY19L4Q7Z388 723 aa12.51□□□□□ -0.41
TCOF1-214ENST00000515035 TMEM102Q8N9M5 508 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms