RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 NCK1P16333 377 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 ATP6V1B2P21281 511 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 ELAVL4P26378 380 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 SKP2Q13309 424 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 FLOT2Q14254 428 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 INAQ16352 499 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 NRF1Q16656 503 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 DUSP7Q16829 419 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 LRRC23Q53EV4 343 aaPredicted RBP10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 ZNF766Q5HY98 468 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 MRPL2Q5T653 305 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 SPINK14Q6IE38 97 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 MARCH3Q86UD3 253 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 VRK2Q86Y07 508 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 FADS6Q8N9I5 356 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 GPR32P1Q8NGA4 272 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 OR5M3Q8NGP4 307 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 C9orf43Q8TAL5 461 aaPredicted RBP10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 SLC26A7Q8TE54 656 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 ARSGQ96EG1 525 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 ARHGDIGQ99819 225 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 RTN4RQ9BZR6 473 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 KLHL28Q9NXS3 571 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 DNAJB12Q9NXW2 375 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 KLRF1Q9NZS2 232 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 MAST4O15021 2626 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 TCRBV3S1A0A5B6 114 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 ERICH4A6NGS2 130 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 ETV2O00321 342 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 SNPHO15079 494 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 TPST1O60507 370 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 FMO6PO60774 539 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 CIB2O75838 187 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 CSTAP01040 98 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 SEMG1P04279 462 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 FESP07332 822 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 CD97P48960 835 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 DLX5P56178 289 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 KCNC4Q03721 635 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 FOXO1Q12778 655 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 ZNF169Q14929 603 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 CD226Q15762 336 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 TIGD3Q6B0B8 471 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 ASB18Q6ZVZ8 466 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 PACS2Q86VP3 889 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 SPPL2CQ8IUH8 684 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 RBMXL3Q8N7X1 1067 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 ZFP62Q8NB50 900 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 OR2M7Q8NG81 312 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 DTNBP1Q96EV8 351 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 DUS3LQ96G46 650 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 PYURFQ96I23 114 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 ARHGAP9Q9BRR9 750 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.93□□□□□ -0.663e-8■■■□□ 14.8
PDLIM5-220ENST00000514830 MAGIXQ9H6Y5 334 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 DEPPQ9NTK1 212 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 ICAM5Q9UMF0 924 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 B3GNT3Q9Y2A9 372 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 TP53TG5Q9Y2B4 290 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 MRPS18CQ9Y3D5 142 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 NCKAP5O14513 1909 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 KALRNO60229 2985 aa10.93□□□□□ -0.66
PDLIM5-220ENST00000514830 SMG1Q96Q15 3661 aaKnown RBP10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 K7EM74 188 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 SCO2O43819 266 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 PEX1O43933 1283 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 GLSO94925 669 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 OPN1SWP03999 348 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 GPIP06744 558 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 FAM87AP0C7U9 286 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 SLC6A8P48029 635 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 P2RX1P51575 399 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 ACTR3P61158 418 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 ZNF117Q03924 483 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 GANABQ14697 944 aaKnown RBP10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 C1orf146Q5VVC0 180 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 BICRALQ6AI39 1079 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 CYP2R1Q6VVX0 501 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 ZNF550Q7Z398 422 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 COMTD1Q86VU5 262 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 PLCZ1Q86YW0 608 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 SULF2Q8IWU5 870 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 C10orf67Q8IYJ2 551 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 CLIP4Q8N3C7 705 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 WDSUB1Q8N9V3 476 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 SMYD1Q8NB12 490 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 CATSPER1Q8NEC5 780 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 PHOSPHO1Q8TCT1 267 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 DUSP19Q8WTR2 217 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 GEMIN6Q8WXD5 167 aaKnown RBP10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 CNOT9Q92600 299 aaKnown RBP10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 PROX1Q92786 737 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 PNPLA2Q96AD5 504 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 ZNF597Q96LX8 424 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 LRGUKQ96M69 825 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 UGT2B28Q9BY64 529 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 POLR2J2Q9GZM3 115 aaKnown RBP10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 POLR2J3Q9H1A7 115 aaKnown RBP10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 UBQLN3Q9H347 655 aa10.92□□□□□ -0.66
PDLIM5-220ENST00000514830 GALNT9Q9HCQ5 603 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms