RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 CPNE4Q96A23 557 aaPredicted RBP17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 MUCL1Q96DR8 90 aa17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 TIGARQ9NQ88 270 aa17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 MIEF1Q9NQG6 463 aa17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 POU2F3Q9UKI9 436 aa17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 KCNS2Q9ULS6 477 aa17.96■□□□□ 0.47
SQSTM1-215ENST00000514093 SUPT7LO94864 414 aa17.95■□□□□ 0.46
SQSTM1-215ENST00000514093 SLITRK5O94991 958 aa17.95■□□□□ 0.46
SQSTM1-215ENST00000514093 HMOX2P30519 316 aa17.95■□□□□ 0.46
SQSTM1-215ENST00000514093 PRIM2P49643 509 aa17.95■□□□□ 0.46
SQSTM1-215ENST00000514093 RASA2Q15283 850 aa17.95■□□□□ 0.46
SQSTM1-215ENST00000514093 TMEM176BQ3YBM2 270 aaPredicted RBP17.95■□□□□ 0.46
SQSTM1-215ENST00000514093 TEX35Q5T0J7 233 aa17.95■□□□□ 0.46
SQSTM1-215ENST00000514093 GALNT18Q6P9A2 607 aa17.95■□□□□ 0.46
SQSTM1-215ENST00000514093 MUC15Q8N387 334 aa17.95■□□□□ 0.46
SQSTM1-215ENST00000514093 NAPGQ99747 312 aaPredicted RBP17.95■□□□□ 0.46
SQSTM1-215ENST00000514093 DHRS9Q9BPW9 319 aa17.95■□□□□ 0.46
SQSTM1-215ENST00000514093 MRPL57Q9BQC6 102 aaKnown RBP17.95■□□□□ 0.46
SQSTM1-215ENST00000514093 C1QTNF3Q9BXJ4 246 aa17.95■□□□□ 0.46
SQSTM1-215ENST00000514093 CXorf36Q9H7Y0 433 aa17.95■□□□□ 0.46
SQSTM1-215ENST00000514093 GRID1Q9ULK0 1009 aa17.95■□□□□ 0.46
SQSTM1-215ENST00000514093 NFU1Q9UMS0 254 aa17.95■□□□□ 0.46
SQSTM1-215ENST00000514093 TIMM22Q9Y584 194 aa17.95■□□□□ 0.46
SQSTM1-215ENST00000514093 LOC100289279A0A1B0GTE1 492 aa17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 LINGO3P0C6S8 592 aa17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 IGHV1-2P23083 117 aa17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 NTSP30990 170 aa17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 MAGEA12P43365 314 aa17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 RNF144AP50876 292 aaPredicted RBP17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 FABP6P51161 128 aa17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 PRKAG1P54619 331 aa17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 C2orf54Q08AI8 447 aa17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 TSNAXIP1Q2TAA8 658 aa17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 UNC50Q53HI1 259 aa17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 SLC22A25Q6T423 547 aa17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 ZNF551Q7Z340 670 aaPredicted RBP17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 FBXL14Q8N1E6 418 aa17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 TMEM151AQ8N4L1 468 aa17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 B4GALNT2Q8NHY0 566 aa17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 PROX1Q92786 737 aa17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 MRPL46Q9H2W6 279 aaKnown RBP17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 ING1Q9UK53 422 aaPredicted RBP17.94■□□□□ 0.46
SQSTM1-215ENST00000514093 ZNF195O14628 629 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 NKX2-2O95096 273 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 PRPS2P11908 318 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 OR3A2P47893 321 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 ZNF83P51522 516 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 CAV1Q03135 178 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 ZNF763Q0D2J5 394 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 HSPB3Q12988 150 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 GGTLC2Q14390 218 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 CD226Q15762 336 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 SPDYAQ5MJ70 313 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 TIMM23BQ5SRD1 257 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 LIPNQ5VXI9 398 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 FAM71E1Q6IPT2 247 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 FAM166AQ6J272 317 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 B3GLCTQ6Y288 498 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 GPRIN3Q6ZVF9 776 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 MMGT1Q8N4V1 131 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 FBXO27Q8NI29 283 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 KCNA7Q96RP8 456 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 SHCBP1LQ9BZQ2 653 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 COQ10BQ9H8M1 238 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 EML4Q9HC35 981 aaKnown RBP17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 GP6Q9HCN6 339 aa17.93■□□□□ 0.46
SQSTM1-215ENST00000514093 A0A1W2PR80 420 aa17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 NGFRP08138 427 aa17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 HPGDP15428 266 aa17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 GGT1P19440 569 aa17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 MAP3K8P41279 467 aa17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 GZMKP49863 264 aa17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 SPATA4Q8NEY3 305 aa17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 OR52N5Q8NH56 324 aa17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 C3orf49Q96BT1 292 aa17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 MSI2Q96DH6 328 aaKnown RBP17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 OTUB1Q96FW1 271 aaPredicted RBP17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 C1orf159Q96HA4 380 aa17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 RADILQ96JH8 1075 aa17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 ZNF300Q96RE9 604 aaPredicted RBP17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 ZNF382Q96SR6 550 aa17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 PSD2Q9BQI7 771 aa17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 PLA2G12AQ9BZM1 189 aa17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 TAS2R7Q9NYW3 318 aa17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 UTP11Q9Y3A2 253 aaKnown RBP17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 POLR3HQ9Y535 204 aaPredicted RBP17.92■□□□□ 0.46
SQSTM1-215ENST00000514093 TTC36A6NLP5 189 aa17.91■□□□□ 0.46
SQSTM1-215ENST00000514093 OIP5O43482 229 aa17.91■□□□□ 0.46
SQSTM1-215ENST00000514093 KCNK2O95069 426 aa17.91■□□□□ 0.46
SQSTM1-215ENST00000514093 PGRP06401 933 aa17.91■□□□□ 0.46
SQSTM1-215ENST00000514093 ACP2P11117 423 aa17.91■□□□□ 0.46
SQSTM1-215ENST00000514093 GPC1P35052 558 aa17.91■□□□□ 0.46
SQSTM1-215ENST00000514093 EIF1P41567 113 aaKnown RBP17.91■□□□□ 0.46
SQSTM1-215ENST00000514093 GSTM5P46439 218 aa17.91■□□□□ 0.46
SQSTM1-215ENST00000514093 CHRNEQ04844 493 aa17.91■□□□□ 0.46
SQSTM1-215ENST00000514093 ZNF678Q5SXM1 525 aa17.91■□□□□ 0.46
SQSTM1-215ENST00000514093 CCNJQ5T5M9 372 aa17.91■□□□□ 0.46
SQSTM1-215ENST00000514093 TMEM108Q6UXF1 575 aa17.91■□□□□ 0.46
SQSTM1-215ENST00000514093 FAM110BQ8TC76 370 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms