RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 AVPR2P30518 371 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 GRK6P43250 576 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 IDH2P48735 452 aaKnown RBP7.72□□□□□ -1.17
RNF4-220ENST00000513578 GPR143P51810 404 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 PGDP52209 483 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 SMSP52788 366 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 EFNA3P52797 238 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 OCA2Q04671 838 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 LSAMPQ13449 338 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 IRF3Q14653 427 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 GINS1Q14691 196 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 TBCEQ15813 527 aaPredicted RBP7.72□□□□□ -1.17
RNF4-220ENST00000513578 NEDD8Q15843 81 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 SMN1Q16637 294 aaKnown RBP7.72□□□□□ -1.17
RNF4-220ENST00000513578 VWA2Q5GFL6 755 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 PLA2G2CQ5R387 149 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 PDZK1Q5T2W1 519 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 PRAMEF17Q5VTA0 474 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 FNDC7Q5VTL7 733 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 UBE2UQ5VVX9 321 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 RPL13AP3Q6NVV1 102 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 PTCHD4Q6ZW05 846 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 PPP1R3BQ86XI6 285 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 KIF18BQ86Y91 864 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 ERI1Q8IV48 349 aaKnown RBP7.72□□□□□ -1.17
RNF4-220ENST00000513578 ZNF441Q8N8Z8 693 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 OR4N2Q8NGD1 307 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 STT3BQ8TCJ2 826 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 ZFAND2BQ8WV99 257 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 CNOT9Q92600 299 aaKnown RBP7.72□□□□□ -1.17
RNF4-220ENST00000513578 SGCDQ92629 289 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 GGHQ92820 318 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 OSTF1Q92882 214 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 TSLPQ969D9 159 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 TP53INP1Q96A56 240 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 HSPBAP1Q96EW2 488 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 CRELD1Q96HD1 420 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 OR6C1Q96RD1 312 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 GFM1Q96RP9 751 aaKnown RBP7.72□□□□□ -1.17
RNF4-220ENST00000513578 GPA33Q99795 319 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 NUDT9Q9BW91 350 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 PRR14Q9BWN1 585 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 YIPF2Q9BWQ6 316 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 PRRG3Q9BZD7 231 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 SEMA4CQ9C0C4 833 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 VN1R1Q9GZP7 353 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 LHPPQ9H008 270 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 ACOT13Q9NPJ3 140 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 FSCN3Q9NQT6 498 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 UBQLN4Q9NRR5 601 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 PNO1Q9NRX1 252 aaKnown RBP7.72□□□□□ -1.17
RNF4-220ENST00000513578 MED17Q9NVC6 651 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 MRPS18AQ9NVS2 196 aaKnown RBP7.72□□□□□ -1.17
RNF4-220ENST00000513578 SLC7A7Q9UM01 511 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 OR10H1Q9Y4A9 318 aa7.72□□□□□ -1.17
RNF4-220ENST00000513578 NPIPA5A0A0B4J1W7 369 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 C2orf92A0A1B0GVN3 265 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 IRGMA1A4Y4 181 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 NPIPA7E9PJI5 369 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 H3BN98 237 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 KHNYNO15037 678 aaKnown RBP7.71□□□□□ -1.18
RNF4-220ENST00000513578 FLRT2O43155 660 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 TSPAN2O60636 221 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 LDOC1O95751 146 aaPredicted RBP7.71□□□□□ -1.18
RNF4-220ENST00000513578 MT-ND2P03891 347 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 HMGN1P05114 100 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 ZGLP1P0C6A0 271 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 GKN3PP0CG01 181 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 NPIPA8P0DM63 369 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 SLC5A2P31639 672 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 MPLP40238 635 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 MASP1P48740 699 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 PCYT1AP49585 367 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 PNLIPRP2P54317 469 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 GP2P55259 537 aaKnown RBP7.71□□□□□ -1.18
RNF4-220ENST00000513578 DCDP81605 110 aaKnown RBP7.71□□□□□ -1.18
RNF4-220ENST00000513578 MC2RQ01718 297 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 NCF4Q15080 339 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 EBPQ15125 230 aaKnown RBP7.71□□□□□ -1.18
RNF4-220ENST00000513578 ANGPT1Q15389 498 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 NSDHLQ15738 373 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 TMEM44Q2T9K0 475 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 MINDY4Q4G0A6 757 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 NKAIN1Q4KMZ8 207 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 MFSD4BQ5TF39 518 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 C1orf189Q5VU69 101 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 TMEM236Q5W0B7 351 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 PWWP2BQ6NUJ5 590 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 SLC27A4Q6P1M0 643 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 ULK3Q6PHR2 472 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 NUP54Q7Z3B4 507 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 ANKRD13BQ86YJ7 626 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 CLVS1Q8IUQ0 354 aaPredicted RBP7.71□□□□□ -1.18
RNF4-220ENST00000513578 NRMQ8IXM6 262 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 NLGN4XQ8N0W4 816 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 BMPERQ8N8U9 685 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 ZNF527Q8NB42 609 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 NFAM1Q8NET5 270 aaPredicted RBP7.71□□□□□ -1.18
RNF4-220ENST00000513578 OR8K3Q8NH51 312 aa7.71□□□□□ -1.18
RNF4-220ENST00000513578 TEX47Q8TBZ9 253 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms