RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 SDCCAG8Q86SQ7 713 aaPredicted RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 RCOR2Q8IZ40 523 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 KRT222Q8N1A0 295 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 CA13Q8N1Q1 262 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 TC2NQ8N9U0 490 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 OR13J1Q8NGT2 312 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 LILRB1Q8NHL6 650 aaPredicted RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 ZCCHC10Q8TBK6 192 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 UTP15Q8TED0 518 aaKnown RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 SLC44A1Q8WWI5 657 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 CTNNBL1Q8WYA6 563 aaPredicted RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 AKAP1Q92667 903 aaKnown RBP eCLIP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 ANKRD9Q96BM1 317 aaPredicted RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 RHBDF1Q96CC6 855 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 CTHRC1Q96CG8 243 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 DTNBP1Q96EV8 351 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 RADILQ96JH8 1075 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF597Q96LX8 424 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 PRR25Q96S07 402 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 PRPF18Q99633 342 aaKnown RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 TUBA1CQ9BQE3 449 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 HAUS8Q9BT25 410 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 HDHD5Q9BXW7 423 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 LRRC40Q9H9A6 602 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 LIN28AQ9H9Z2 209 aaKnown RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 EML4Q9HC35 981 aaKnown RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 CCDC177Q9NQR7 707 aaPredicted RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 PRTFDC1Q9NRG1 225 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 PLSCR4Q9NRQ2 329 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 DNAJC11Q9NVH1 559 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 GAR1Q9NY12 217 aaKnown RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 CLCF1Q9UBD9 225 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 MGAT4CQ9UBM8 478 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 COPS7AQ9UBW8 275 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 DLGAP4Q9Y2H0 992 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 SLC6A5Q9Y345 797 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 MRPS18CQ9Y3D5 142 aaKnown RBP3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 RNF115Q9Y4L5 304 aa3.25□□□□□ -1.89
PDLIM5-218ENST00000513341 CADP27708 2225 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 ALPK2Q86TB3 2170 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 A0A087X0T9 212 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 A0A1W2PP18 115 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 TRBC2A0A5B9 178 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 OR51F1A6NGY5 319 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 C17orf105B2RV13 164 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 H7C0C1 242 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 TRIM77I1YAP6 450 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 AP4M1O00189 453 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 NDUFS4O43181 175 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 SPRY2O43597 315 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 OR1F1O43749 312 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 NDUFS3O75489 264 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 FTCDO95954 541 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 PLAUP00749 431 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 ALDOAP04075 364 aaKnown RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 IFNA16P05015 189 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 SOD3P08294 240 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 FAM228BP0C875 321 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 MPC1LP0DKB6 136 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 ENO3P13929 434 aaPredicted RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 NAGAP17050 411 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF10P21506 573 aaPredicted RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 MATN1P21941 496 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 PCMT1P22061 227 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 PSMB4P28070 264 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 GSTM2P28161 218 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 IMPA1P29218 277 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 PTPN6P29350 595 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 COILP38432 576 aaPredicted RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 CDKN1AP38936 164 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 GSTM5P46439 218 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 ATP5OP48047 213 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 TMED10P49755 219 aaKnown RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 CCR8P51685 355 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 NUDT6P53370 316 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 RAB38P57729 211 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 UBE2HP62256 183 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 OLR1P78380 273 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 PRAMEP78395 509 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 STX4Q12846 297 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 SNTA1Q13424 505 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 RAB35Q15286 201 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 PFKFB4Q16877 469 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 TTLL9Q3SXZ7 439 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF672Q499Z4 452 aaPredicted RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 EIPR1Q53HC9 387 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 NCMAPQ5T1S8 102 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 ATPAF1Q5TC12 328 aaPredicted RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 AGAP6Q5VW22 663 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 LRRC8EQ6NSJ5 796 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 TMEM81Q6P7N7 255 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 AAGABQ6PD74 315 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 AGTRAPQ6RW13 159 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 BBS12Q6ZW61 710 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 CHMP1BQ7LBR1 199 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 ZNF550Q7Z398 422 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 KIAA1328Q86T90 577 aa3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 TBC1D1Q86TI0 1168 aaPredicted RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 CDKL3Q8IVW4 592 aaPredicted RBP3.24□□□□□ -1.89
PDLIM5-218ENST00000513341 GCNT2Q8N0V5 402 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms