RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 FLYWCH1Q4VC44 716 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 MRPL2Q5T653 305 aaKnown RBP12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 SYT6Q5T7P8 510 aaPredicted RBP12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 UBE2UQ5VVX9 321 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 MEDAGQ5VYS4 303 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 ZNF613Q6PF04 617 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 CASP12Q6UXS9 341 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 Q6ZPB1 254 aaPredicted RBP12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 TTLL10Q6ZVT0 673 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 PTCHD4Q6ZW05 846 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 MBOAT2Q6ZWT7 520 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 GDF7Q7Z4P5 450 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 MRGPREQ86SM8 312 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 NAXDQ8IW45 347 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 OR2I1PQ8NGU4 316 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 OR1L3Q8NH93 324 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 SGCDQ92629 289 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 C12orf43Q96C57 262 aaKnown RBP12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 ART5Q96L15 291 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 COPS4Q9BT78 406 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 POLDIP3Q9BY77 421 aaKnown RBP12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 RBCK1Q9BYM8 510 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 FAM117AQ9C073 453 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 CCDC90BQ9GZT6 254 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 LHPPQ9H008 270 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 OR10A5Q9H207 317 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 GPN2Q9H9Y4 310 aaPredicted RBP12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 KLHL3Q9UH77 587 aa12.13□□□□□ -0.47
DEPDC1B-206ENST00000512452 CPSF4LA6NMK7 179 aaKnown RBP12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 H3BN98 237 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 FBLP22087 321 aaKnown RBP12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 POU1F1P28069 291 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 OMPP47874 163 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 SEPHS1P49903 392 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 ST13P50502 369 aaKnown RBP12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 DCAF7P61962 342 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 BTG2P78543 158 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 CDK5Q00535 292 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 DYNC1I2Q13409 638 aaKnown RBP12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 KCNAB1Q14722 419 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 SMN1Q16637 294 aaKnown RBP12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 SYT16Q17RD7 645 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 TMEM44Q2T9K0 475 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 HLA-BQ31612 363 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 CCNJQ5T5M9 372 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 GPR107Q5VW38 600 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 ZNF550Q7Z398 422 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 ANKRD13BQ86YJ7 626 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 CCDC103Q8IW40 242 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 ZNF440Q8IYI8 595 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 SHISA5Q8N114 240 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 FAM26EQ8N5C1 309 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 ZNF615Q8N8J6 731 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 Q8N9G6 341 aaPredicted RBP12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 OR4D9Q8NGE8 314 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 WDR36Q8NI36 951 aaKnown RBP12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 TEX47Q8TBZ9 253 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 GGHQ92820 318 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 UBE2FQ969M7 185 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 ZNF501Q96CX3 271 aaPredicted RBP12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 MPP4Q96JB8 637 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 HS6ST2Q96MM7 605 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 PTCHD1Q96NR3 888 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 SLC46A1Q96NT5 459 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 TEX12Q9BXU0 123 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 TRIM2Q9C040 744 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 HOXD1Q9GZZ0 328 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 RACGAP1Q9H0H5 632 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 ZNF304Q9HCX3 659 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 MKKSQ9NPJ1 570 aaPredicted RBP12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 ACOT13Q9NPJ3 140 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 TIMMDC1Q9NPL8 285 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 NECTIN3Q9NQS3 549 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 TMEM5Q9Y2B1 443 aa12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 TMEM184BQ9Y519 407 aaPredicted RBP12.12□□□□□ -0.47
DEPDC1B-206ENST00000512452 IRGMA1A4Y4 181 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 H3BMQ9 156 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 KLF4O43474 513 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 FRS3O43559 492 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 CER1O95813 267 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 IFNA16P05015 189 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 MYF5P13349 255 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 FOLR1P15328 257 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 TNNI3P19429 210 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 MAOAP21397 527 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 SSTR4P31391 388 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 RORAP35398 523 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 SLC15A1P46059 708 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 GIPRP48546 466 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 MASP1P48740 699 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 ATP12AP54707 1039 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 GP2P55259 537 aaKnown RBP12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 TLE3Q04726 772 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 FGFBP1Q14512 234 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 ELAVL1Q15717 326 aaKnown RBP12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 RNLSQ5VYX0 342 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 RHBDD2Q6NTF9 364 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 FIGNL1Q6PIW4 674 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 AHSA2Q719I0 299 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 HMGN2P46Q86SG4 172 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms