RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 GRHL1Q9NZI5 618 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 VSX1Q9NZR4 365 aaPredicted RBP5.98□□□□□ -1.45
COPS4-209ENST00000511653 PACSIN3Q9UKS6 424 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 CES1P1Q9UKY3 287 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 EIF3LQ9Y262 564 aaKnown RBP5.98□□□□□ -1.45
COPS4-209ENST00000511653 PLLPQ9Y342 182 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 ANGPTL3Q9Y5C1 460 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 CDHR4A6H8M9 788 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 TMEM233B4DJY2 109 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 H0YC42 278 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 OR7A17O14581 309 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 ARHGEF9O43307 516 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 HCRTR2O43614 444 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 UGDHO60701 494 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 SEMA3DO95025 777 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 KLK1P06870 262 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 RHOXF2BP0C7M4 288 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 ZNF708P17019 499 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 SPRP35270 261 aaPredicted RBP5.98□□□□□ -1.45
COPS4-209ENST00000511653 MSX2P35548 267 aaPredicted RBP5.98□□□□□ -1.45
COPS4-209ENST00000511653 FEN1P39748 380 aaKnown RBP5.98□□□□□ -1.45
COPS4-209ENST00000511653 TPD52P55327 224 aaPredicted RBP5.98□□□□□ -1.45
COPS4-209ENST00000511653 RPP38P78345 283 aaKnown RBP5.98□□□□□ -1.45
COPS4-209ENST00000511653 PHEXP78562 749 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 TRAF3Q13114 568 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 TRMT12Q53H54 448 aaKnown RBP5.98□□□□□ -1.45
COPS4-209ENST00000511653 ZNF474Q6S9Z5 364 aaPredicted RBP5.98□□□□□ -1.45
COPS4-209ENST00000511653 C3orf62Q6ZUJ4 267 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 NUP54Q7Z3B4 507 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 IFNEQ86WN2 208 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 LRRC75A-AS1Q8N1F1 130 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 L3MBTL4Q8NA19 623 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 OR7G1Q8NGA0 311 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 TMBIM1Q969X1 311 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 STARD4Q96DR4 205 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 CNRIP1Q96F85 164 aaPredicted RBP5.98□□□□□ -1.45
COPS4-209ENST00000511653 MARK4Q96L34 752 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 SFXN2Q96NB2 322 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 GPR78Q96P69 363 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 CCL19Q99731 98 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 PIP5K1AQ99755 562 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 CPPED1Q9BRF8 314 aaPredicted RBP5.98□□□□□ -1.45
COPS4-209ENST00000511653 SSBP3Q9BWW4 388 aaPredicted RBP5.98□□□□□ -1.45
COPS4-209ENST00000511653 OPN3Q9H1Y3 402 aaPredicted RBP5.98□□□□□ -1.45
COPS4-209ENST00000511653 ZBTB26Q9HCK0 441 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 TAS2R10Q9NYW0 307 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 CPSF2Q9P2I0 782 aaKnown RBP5.98□□□□□ -1.45
COPS4-209ENST00000511653 BCAP29Q9UHQ4 241 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 ZNF639Q9UID6 485 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 EXO1Q9UQ84 846 aaKnown RBP5.98□□□□□ -1.45
COPS4-209ENST00000511653 SNX13Q9Y5W8 968 aa5.98□□□□□ -1.45
COPS4-209ENST00000511653 YLPM1P49750 1951 aaKnown RBP5.97□□□□□ -1.45
COPS4-209ENST00000511653 MALRD1Q5VYJ5 2156 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 NUP214P35658 2090 aaPredicted RBP5.97□□□□□ -1.45
COPS4-209ENST00000511653 CCDC188H7C350 402 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 FOXE1O00358 373 aaPredicted RBP5.97□□□□□ -1.45
COPS4-209ENST00000511653 CASKO14936 926 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 RAD51CO43502 376 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 ERAL1O75616 437 aaKnown RBP5.97□□□□□ -1.45
COPS4-209ENST00000511653 CBR3O75828 277 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 CLDN9O95484 217 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 ATP1B1P05026 303 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 C2P06681 752 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 CTAGE8P0CG41 777 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 PORP16435 677 aaPredicted RBP5.97□□□□□ -1.45
COPS4-209ENST00000511653 NAGAP17050 411 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 HK1P19367 917 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 CRYGSP22914 178 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 TNFSF4P23510 183 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 CRABP2P29373 138 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 SRD5A2P31213 254 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 CD79BP40259 229 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 EMDP50402 254 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 ALDH18A1P54886 795 aaKnown RBP5.97□□□□□ -1.45
COPS4-209ENST00000511653 CLDN15P56746 228 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 B3GALT5-AS1P59052 145 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 SIRPAP78324 504 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 HMGCS1Q01581 520 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 KRTAP1-1Q07627 177 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 ILF2Q12905 390 aaKnown RBP5.97□□□□□ -1.45
COPS4-209ENST00000511653 SNTA1Q13424 505 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 TRADDQ15628 312 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 ACKR1Q16570 336 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 UBAP2Q5T6F2 1119 aaKnown RBP5.97□□□□□ -1.45
COPS4-209ENST00000511653 GRTP1Q5TC63 336 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 C6orf163Q5TEZ5 329 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 FRG2Q64ET8 278 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 SLC48A1Q6P1K1 146 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 ENPP6Q6UWR7 440 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 NPSR1Q6W5P4 371 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 RPS27LQ71UM5 84 aaKnown RBP5.97□□□□□ -1.45
COPS4-209ENST00000511653 COMMD6Q7Z4G1 85 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 CCDC25Q86WR0 208 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 PLCZ1Q86YW0 608 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 CTAGE4Q8IX94 777 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 UBQLNLQ8IYU4 475 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 RNF152Q8N8N0 203 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 PTGR2Q8N8N7 351 aaPredicted RBP5.97□□□□□ -1.45
COPS4-209ENST00000511653 CNEP1R1Q8N9A8 125 aa5.97□□□□□ -1.45
COPS4-209ENST00000511653 OR52R1Q8NGF1 315 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms