RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 KHKP50053 298 aa12.24□□□□□ -0.45
SNF8-206ENST00000509989 PLPPR5Q32ZL2 321 aa12.24□□□□□ -0.45
SNF8-206ENST00000509989 AGKQ53H12 422 aa12.24□□□□□ -0.45
SNF8-206ENST00000509989 NSUN5P2Q63ZY6 315 aa12.24□□□□□ -0.45
SNF8-206ENST00000509989 BLOC1S3Q6QNY0 202 aa12.24□□□□□ -0.45
SNF8-206ENST00000509989 C16orf62Q7Z3J2 963 aa12.24□□□□□ -0.45
SNF8-206ENST00000509989 GLB1L3Q8NCI6 653 aaPredicted RBP12.24□□□□□ -0.45
SNF8-206ENST00000509989 LILRB4Q8NHJ6 448 aa12.24□□□□□ -0.45
SNF8-206ENST00000509989 B4GALNT2Q8NHY0 566 aa12.24□□□□□ -0.45
SNF8-206ENST00000509989 CA5BP1Q8WTZ4 195 aa12.24□□□□□ -0.45
SNF8-206ENST00000509989 FIG4Q92562 907 aa12.24□□□□□ -0.45
SNF8-206ENST00000509989 SLC38A1Q9H2H9 487 aa12.24□□□□□ -0.45
SNF8-206ENST00000509989 IKZF5Q9H5V7 419 aa12.24□□□□□ -0.45
SNF8-206ENST00000509989 TMEM185BQ9H7F4 350 aa12.24□□□□□ -0.45
SNF8-206ENST00000509989 FGFR1OP2Q9NVK5 253 aa12.24□□□□□ -0.45
SNF8-206ENST00000509989 DTNAQ9Y4J8 743 aa12.24□□□□□ -0.45
SNF8-206ENST00000509989 PCDHB14Q9Y5E9 798 aa12.24□□□□□ -0.45
SNF8-206ENST00000509989 ABCA12Q86UK0 2595 aa12.24□□□□□ -0.45
SNF8-206ENST00000509989 A0A0G2JND7 137 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 KIAA0513O60268 411 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 H6PDO95479 791 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 KRT16P08779 473 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 LINGO3P0C6S8 592 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 GABRA1P14867 456 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 CHMP24386 653 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 DLX5P56178 289 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 FOXF1Q12946 379 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 ZNF141Q15928 474 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 GPAT3Q53EU6 434 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 RPS26P11Q5JNZ5 115 aaPredicted RBP12.23□□□□□ -0.45
SNF8-206ENST00000509989 RIPPLY2Q5TAB7 128 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 BHLHB9Q6PI77 547 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 GGNQ86UU5 652 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 ZPLD1Q8TCW7 415 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 RNF145Q96MT1 663 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 TMEM120AQ9BXJ8 343 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 SAP130Q9H0E3 1048 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 TPT1P8Q9HAU6 139 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 CLCF1Q9UBD9 225 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 L3MBTL1Q9Y468 752 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 PCDHGB3Q9Y5G1 929 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 KLF2Q9Y5W3 355 aaPredicted RBP12.23□□□□□ -0.45
SNF8-206ENST00000509989 MAST4O15021 2626 aa12.23□□□□□ -0.45
SNF8-206ENST00000509989 FREM1Q5H8C1 2179 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 MBD3L4A6NDZ8 208 aaPredicted RBP12.22□□□□□ -0.45
SNF8-206ENST00000509989 MBD3L3A6NE82 208 aaPredicted RBP12.22□□□□□ -0.45
SNF8-206ENST00000509989 SERINC4A6NH21 518 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 MBD3L5A6NJ08 208 aaPredicted RBP12.22□□□□□ -0.45
SNF8-206ENST00000509989 STX11O75558 287 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 PEPDP12955 493 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 HPGDP15428 266 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 NCF2P19878 526 aaPredicted RBP12.22□□□□□ -0.45
SNF8-206ENST00000509989 POU3F2P20265 443 aaPredicted RBP12.22□□□□□ -0.45
SNF8-206ENST00000509989 CHRNB4P30926 498 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 SKP2Q13309 424 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 RCAN2Q14206 197 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 CTU2Q2VPK5 515 aaKnown RBP12.22□□□□□ -0.45
SNF8-206ENST00000509989 C6orf10Q5SRN2 563 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 RETREG3Q86VR2 466 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 ZNF295-AS1Q8N0V1 137 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 GCNT2Q8N0V5 402 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 MBD3L2Q8NHZ7 208 aaPredicted RBP12.22□□□□□ -0.45
SNF8-206ENST00000509989 FBXO27Q8NI29 283 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 GPR119Q8TDV5 335 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 MAL2Q969L2 176 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 SPDL1Q96EA4 605 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 ITCHQ96J02 903 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 THUMPD3Q9BV44 507 aaKnown RBP12.22□□□□□ -0.45
SNF8-206ENST00000509989 NMUR2Q9GZQ4 415 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 PTGES2Q9H7Z7 377 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 COQ3Q9NZJ6 369 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 VAPAQ9P0L0 249 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 WDR45Q9Y484 360 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 APCP25054 2843 aa12.22□□□□□ -0.45
SNF8-206ENST00000509989 TRBV5-3A0A0A0MS03 114 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 A0A0J9YW62 118 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 CD8B2A6NJW9 211 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 DUXAA6NLW8 204 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 AP3D1O14617 1153 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 CYP7B1O75881 506 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 UBTFL6P0CB48 400 aaPredicted RBP12.21□□□□□ -0.45
SNF8-206ENST00000509989 ZCCHC18P0CG32 403 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 KLK2P20151 261 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 BMP5P22003 454 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 LCN1P31025 176 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 PGM1P36871 562 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 SLC6A8P48029 635 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 STX1BP61266 288 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 SELPLGQ14242 412 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 FGFBP1Q14512 234 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 SQLEQ14534 574 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 GANABQ14697 944 aaKnown RBP12.21□□□□□ -0.45
SNF8-206ENST00000509989 ENPP6Q6UWR7 440 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 LACC1Q8IV20 430 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 PM20D2Q8IYS1 436 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 ZNF619Q8N2I2 560 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 ACBD4Q8NC06 268 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 ASB5Q8WWX0 329 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 CNOT9Q92600 299 aaKnown RBP12.21□□□□□ -0.45
SNF8-206ENST00000509989 MARVELD3Q96A59 401 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms