RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 SLC6A13Q9NSD5 602 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 DEPPQ9NTK1 212 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 TUBA8Q9NY65 449 aaPredicted RBP7.71□□□□□ -1.18
PDGFC-205ENST00000506880 ARMCX1Q9P291 453 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 TMEM181Q9P2C4 612 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 SEC14L3Q9UDX4 400 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 PCNX1Q96RV3 2341 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 TRGV5A0A0B4J1U4 118 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 LOC100653049A0A140TA62 436 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 ELOVL7A1L3X0 281 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 CDHR4A6H8M9 788 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 C9JVG2 144 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 PRRG2O14669 202 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 ADAM10O14672 748 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 CDC40O60508 579 aaKnown RBP eCLIP7.7□□□□□ -1.18
PDGFC-205ENST00000506880 C1QL1O75973 258 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 KRT34O76011 436 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 CBX6O95503 412 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 IGF2P01344 180 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 IGKV1D-16P01601 117 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 BCHEP06276 602 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 GSNP06396 782 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 CHRM4P08173 479 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 PABPC4LP0CB38 370 aaKnown RBP7.7□□□□□ -1.18
PDGFC-205ENST00000506880 THRBP10828 461 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 ETFAP13804 333 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 EFNA1P20827 205 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-205ENST00000506880 ME2P23368 584 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 DPP4P27487 766 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 GDF1P27539 372 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 IFNA8P32881 189 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 PGM1P36871 562 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 APOBEC1P41238 236 aaKnown RBP7.7□□□□□ -1.18
PDGFC-205ENST00000506880 PCYT1AP49585 367 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 NUDT2P50583 147 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 GZMMP51124 257 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 FUT5Q11128 374 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 SKP2Q13309 424 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 COL9A2Q14055 689 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-205ENST00000506880 GK3PQ14409 553 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 ADRM1Q16186 407 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 NNATQ16517 81 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 CMPK2Q5EBM0 449 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 COX20Q5RI15 118 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 PDSS1Q5T2R2 415 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 WLSQ5T9L3 541 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 VASNQ6EMK4 673 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 TMEM211Q6ICI0 200 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 FIGNL1Q6PIW4 674 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 DNAJC14Q6Y2X3 702 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-205ENST00000506880 C16orf47Q6ZP98 133 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-205ENST00000506880 MAMDC2Q7Z304 686 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-205ENST00000506880 IFNEQ86WN2 208 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 PTRH1Q86Y79 214 aaKnown RBP7.7□□□□□ -1.18
PDGFC-205ENST00000506880 TREML1Q86YW5 311 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 SLC15A3Q8IY34 581 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 PRR22Q8IZ63 422 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 CISD2Q8N5K1 135 aaKnown RBP7.7□□□□□ -1.18
PDGFC-205ENST00000506880 FITM2Q8N6M3 262 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 LSMEM1Q8N8F7 131 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 OR52P1PQ8NH57 321 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 PHOSPHO1Q8TCT1 267 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 ZPLD1Q8TCW7 415 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 DNAJA4Q8WW22 397 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-205ENST00000506880 RELTQ969Z4 430 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 TACO1Q9BSH4 297 aaKnown RBP7.7□□□□□ -1.18
PDGFC-205ENST00000506880 YIPF4Q9BSR8 244 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 KRTAP3-3Q9BYR6 98 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 KRTAP3-2Q9BYR7 98 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 PRDM14Q9GZV8 571 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 PCDHAC1Q9H158 963 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 TP63Q9H3D4 680 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-205ENST00000506880 ALG2Q9H553 416 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 PIF1Q9H611 641 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 GORASP2Q9H8Y8 452 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 SERINC1Q9NRX5 453 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 ACER3Q9NUN7 267 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 ASF1BQ9NVP2 202 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 ANKRD10Q9NXR5 420 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 SLAMF8Q9P0V8 285 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 TESQ9UGI8 421 aaKnown RBP7.7□□□□□ -1.18
PDGFC-205ENST00000506880 MAGEL2Q9UJ55 1249 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 RPS6KA6Q9UK32 745 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 DKKL1Q9UK85 242 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 SLC13A4Q9UKG4 626 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 ICAM5Q9UMF0 924 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 SLC9A8Q9Y2E8 581 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 CSAG2Q9Y5P2 127 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 MYO7BQ6PIF6 2116 aa7.7□□□□□ -1.18
PDGFC-205ENST00000506880 MPDZO75970 2070 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 DOPEY1Q5JWR5 2465 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 CFAP73A6NFT4 308 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 CCT8L1PA6NM43 557 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 E9PLN8 166 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 AIM2O14862 343 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 ZNF208O43345 1280 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 HCRTR2O43614 444 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 FCMRO60667 390 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 NTN1O95631 604 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms