RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 REEP1Q9H902 201 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 NMNAT1Q9HAN9 279 aaPredicted RBP9.53□□□□□ -0.88
TPM3-217ENST00000504663 SH2D2AQ9NP31 389 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 UBQLN4Q9NRR5 601 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 P4HTMQ9NXG6 502 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 SLC9A8Q9Y2E8 581 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 SAMHD1Q9Y3Z3 626 aaKnown RBP9.53□□□□□ -0.88
TPM3-217ENST00000504663 NPFFR2Q9Y5X5 522 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 PTPRZ1P23471 2315 aaPredicted RBP9.53□□□□□ -0.88
TPM3-217ENST00000504663 EML6Q6ZMW3 1958 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 NSG1A0A0A6YYJ2 146 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 A0A1W2PRQ8 180 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 ARRDC5A6NEK1 342 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 ALG1L2C9J202 215 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 G3V2T6 193 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 TNFRSF11BO00300 401 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 OR2J2O76002 312 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 OR5F1O95221 314 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 WISP1O95388 367 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 F12P00748 615 aaPredicted RBP9.52□□□□□ -0.89
TPM3-217ENST00000504663 TP53P04637 393 aaPredicted RBP9.52□□□□□ -0.89
TPM3-217ENST00000504663 LIPCP11150 499 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 NAGAP17050 411 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 EVI2BP34910 448 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 ADARB1P78563 741 aaKnown RBP9.52□□□□□ -0.89
TPM3-217ENST00000504663 EPS8Q12929 822 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 DGCR6Q14129 220 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 GK3PQ14409 553 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 NTRK2Q16620 822 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 ZNF791Q3KP31 576 aaPredicted RBP9.52□□□□□ -0.89
TPM3-217ENST00000504663 ENTPD8Q5MY95 495 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 HLA-DQA1Q5Y7H0 255 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 CBLN3Q6UW01 205 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 USP51Q70EK9 711 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 STK32CQ86UX6 486 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 HIPK1Q86Z02 1210 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 OR9Q2Q8NGE9 314 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 MCHR1Q99705 422 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 ZNF426Q9BUY5 554 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 EXOSC3Q9NQT5 275 aaKnown RBP9.52□□□□□ -0.89
TPM3-217ENST00000504663 C8orf4Q9NR00 106 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 CTPS2Q9NRF8 586 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.52□□□□□ -0.89
TPM3-217ENST00000504663 TESQ9UGI8 421 aaKnown RBP9.52□□□□□ -0.89
TPM3-217ENST00000504663 KLK13Q9UKR3 277 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 PCDHGB5Q9Y5G0 923 aa9.52□□□□□ -0.89
TPM3-217ENST00000504663 MED13Q9UHV7 2174 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 A0A0B4J2E0 115 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 A0A1B0GX12 115 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 SH3PXD2BA1X283 911 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 CPSF4LA6NMK7 179 aaKnown RBP9.51□□□□□ -0.89
TPM3-217ENST00000504663 KLF4O43474 513 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 REM1O75628 298 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 OR6B1O95007 311 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 SNAP29O95721 258 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 SERPINA7P05543 415 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 H1F0P07305 194 aaKnown RBP9.51□□□□□ -0.89
TPM3-217ENST00000504663 ACADSP16219 412 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 RBMS1P29558 406 aaKnown RBP9.51□□□□□ -0.89
TPM3-217ENST00000504663 SOX3P41225 446 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 ST13P50502 369 aaKnown RBP9.51□□□□□ -0.89
TPM3-217ENST00000504663 MLF1P58340 268 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 RPS15P62841 145 aaKnown RBP9.51□□□□□ -0.89
TPM3-217ENST00000504663 ZNF117Q03924 483 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 CLN3Q13286 438 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 MICAQ29983 383 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 COLEC12Q5KU26 742 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 OTUD3Q5T2D3 398 aaPredicted RBP9.51□□□□□ -0.89
TPM3-217ENST00000504663 ATP1A1-AS1Q5TC04 95 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 ZNF468Q5VIY5 522 aaPredicted RBP9.51□□□□□ -0.89
TPM3-217ENST00000504663 BICRALQ6AI39 1079 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 FCRLBQ6BAA4 426 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 PGBD2Q6P3X8 592 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 GDF7Q7Z4P5 450 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 VASH2Q86V25 355 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 ZNF227Q86WZ6 799 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 ZDHHC13Q8IUH4 622 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 NKAIN4Q8IVV8 208 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 SLC5A8Q8N695 610 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 LSMEM1Q8N8F7 131 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 GATSQ8NAP1 163 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 OR10G2Q8NGC3 310 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 OR5L2Q8NGL0 311 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 OR52J3Q8NH60 311 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 ADAMTS16Q8TE57 1224 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 TFAP2CQ92754 450 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 ALPK1Q96QP1 1244 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 GPA33Q99795 319 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 NIPSNAP1Q9BPW8 284 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 DEFB126Q9BYW3 111 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 POLR2J2Q9GZM3 115 aaKnown RBP9.51□□□□□ -0.89
TPM3-217ENST00000504663 HOXD1Q9GZZ0 328 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 POLR2J3Q9H1A7 115 aaKnown RBP9.51□□□□□ -0.89
TPM3-217ENST00000504663 VCX3BQ9H321 246 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 EVA1AQ9H8M9 152 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 PROK2Q9HC23 129 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 PDP1Q9P0J1 537 aaPredicted RBP9.51□□□□□ -0.89
TPM3-217ENST00000504663 ZNF232Q9UNY5 417 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 SLC35A3Q9Y2D2 325 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 AP4B1Q9Y6B7 739 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms