RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 SYNPO2LQ9H987 977 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 TAS2R3Q9NYW6 316 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 TAC3Q9UHF0 121 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 GMEB2Q9UKD1 530 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 POMT2Q9UKY4 750 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 CCL26Q9Y258 94 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 ASF1AQ9Y294 204 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 EXOSC1Q9Y3B2 195 aaKnown RBP7.11□□□□□ -1.27
NEDD9-208ENST00000504387 NUBP2Q9Y5Y2 271 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 SCN8AQ9UQD0 1980 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 MEIKINA0A087WXM9 373 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-208ENST00000504387 TMEM129A0AVI4 362 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 ACOD1A6NK06 481 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF98A6NK75 572 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 IDSB3KWA1 339 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 G3V3Q6 166 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 TO15178 435 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 FCMRO60667 390 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 KCNJ13O60928 360 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF821O75541 412 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-208ENST00000504387 HLA-DQB1P01920 261 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 CSN2P05814 226 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 CHRM4P08173 479 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 CLTBP09497 229 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 DRD2P14416 443 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 RAB3BP20337 219 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 NFYAP23511 347 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-208ENST00000504387 FGF9P31371 208 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-208ENST00000504387 SOX2P48431 317 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 CCR8P51685 355 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 BTG1P62324 171 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 CDK5Q00535 292 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF311Q5JNZ3 666 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 CCNJQ5T5M9 372 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 HEPHL1Q6MZM0 1159 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 CDC73Q6P1J9 531 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 METAP1DQ6UB28 335 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-208ENST00000504387 LRRN1Q6UXK5 716 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 FAM219AQ8IW50 185 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 DCAF4L2Q8NA75 395 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 OR5J2Q8NH18 312 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 LGALS14Q8TCE9 139 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 HAVCR2Q8TDQ0 301 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 ZDHHC1Q8WTX9 485 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 SMPDL3AQ92484 453 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 GHSRQ92847 366 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 SLC25A28Q96A46 364 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 FBXO17Q96EF6 278 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 BBS4Q96RK4 519 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 POT1Q9NUX5 634 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 SPG21Q9NZD8 308 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 KCND3Q9UK17 655 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 AP1M2Q9Y6Q5 423 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 RALGAPA2Q2PPJ7 1873 aa7.11□□□□□ -1.27
NEDD9-208ENST00000504387 PLPP1O14494 284 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 DPM1O60762 260 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 LEFTY1O75610 366 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 EPPINO95925 133 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 RLN2P04090 185 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 HMGN2P05204 90 aaKnown RBP7.1□□□□□ -1.27
NEDD9-208ENST00000504387 CBSLP0DN79 551 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 ZNF35P13682 527 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 PRPH2P23942 346 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 PPP2R1BP30154 601 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 HOXC8P31273 242 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 CBSP35520 551 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 SP3Q02447 781 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 AGERQ15109 404 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 TCTN1Q2MV58 587 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 MINDY4Q4G0A6 757 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 HSD17B12Q53GQ0 312 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 C9orf64Q5T6V5 341 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 HBMQ6B0K9 141 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 CXXC5Q7LFL8 322 aaKnown RBP7.1□□□□□ -1.27
NEDD9-208ENST00000504387 CBLN2Q8IUK8 224 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 ACBD7Q8N6N7 88 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 DNAAF1Q8NEP3 725 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 LILRB1Q8NHL6 650 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-208ENST00000504387 ABHD4Q8TB40 342 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 CPNE2Q96FN4 548 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-208ENST00000504387 SLC35G5Q96KT7 338 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 OR14A2Q96R54 314 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 MED18Q9BUE0 208 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 SARGQ9BW04 601 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 REG4Q9BYZ8 158 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 TMEM231Q9H6L2 316 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 RETREG1Q9H6L5 497 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 EVA1AQ9H8M9 152 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 SCPEP1Q9HB40 452 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 BABAM2Q9NXR7 383 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 MYEF2Q9P2K5 600 aaKnown RBP7.1□□□□□ -1.27
NEDD9-208ENST00000504387 TRAV20A0A0B4J274 112 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 C7orf66A4D0T2 115 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 K7ESM1 405 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 GPR31O00270 319 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 OR1F1O43749 312 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 TMPRSS11DO60235 418 aa7.1□□□□□ -1.27
NEDD9-208ENST00000504387 RPP14O95059 124 aaKnown RBP7.1□□□□□ -1.27
NEDD9-208ENST00000504387 ELFN1P0C7U0 828 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms