RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 CLDN18P56856 261 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 PMPCAQ10713 525 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 FADDQ13158 208 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 FGFBP1Q14512 234 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 RGNQ15493 299 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 MAPK11Q15759 364 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 PLPPR5Q32ZL2 321 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 CBLN3Q6UW01 205 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 DLEU7Q6UYE1 221 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 MAMDC2Q7Z304 686 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 GTPBP8Q8N3Z3 284 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 ZPLD1Q8TCW7 415 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 RND1Q92730 232 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 ZBTB8AQ96BR9 441 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 ZG16BQ96DA0 208 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 KLHDC3Q9BQ90 382 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 SAR1AQ9NR31 198 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 VDAC3Q9Y277 283 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 L3MBTL1Q9Y468 752 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 A1L4Q6 167 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 FAM47E-STBD1D6RA91 191 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 ANGPT2O15123 496 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 EPPINO95925 133 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 TFPTP0C1Z6 253 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 LINGO3P0C6S8 592 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 PEPDP12955 493 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 ZNF708P17019 499 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 ART3Q13508 389 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 SEM1Q6ZVN7 128 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 EIF3MQ7L2H7 374 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 RETREG3Q86VR2 466 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 TOR1AIP2Q8NFQ8 470 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 OR5M1Q8NGP8 315 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 OR5W2Q8NH69 310 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 ARSGQ96EG1 525 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 LAT2Q9GZY6 243 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 RUBCNLQ9H714 662 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 MTHFD2LQ9H903 347 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 COQ3Q9NZJ6 369 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 CALML5Q9NZT1 146 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 PLEKHB1Q9UF11 243 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 SLC35A3Q9Y2D2 325 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 ZNF337Q9Y3M9 751 aa16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 USP9YO00507 2555 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-209ENST00000503346 ASH1LQ9NR48 2969 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 DSPPQ9NZW4 1301 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 DOPEY2Q9Y3R5 2298 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 AGAP5A6NIR3 686 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 CD8B2A6NJW9 211 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 DNAJA2O60884 412 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 CSTAP01040 98 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 POU3F2P20265 443 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 RPS4Y1P22090 263 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 PSMA4P25789 261 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 ADSLP30566 484 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 PGM1P36871 562 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 CRISP3P54108 245 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 KLF10Q13118 480 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 SKP2Q13309 424 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 NDUFAF6Q330K2 333 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 RIPPLY2Q5TAB7 128 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 NSUN5P2Q63ZY6 315 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 MYO7BQ6PIF6 2116 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 ADGRE4PQ86SQ3 457 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 LACC1Q8IV20 430 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 FAM71CQ8NEG0 241 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 GPR119Q8TDV5 335 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 SLC38A5Q8WUX1 472 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 ASB5Q8WWX0 329 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 CALHM2Q9HA72 323 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 A4GALTQ9NPC4 353 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 RNF6Q9Y252 685 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 KLF2Q9Y5W3 355 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 AP4B1Q9Y6B7 739 aa16.47■□□□□ 0.23
PDLIM7-209ENST00000503346 SHISA8B8ZZ34 492 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 H0Y3Z8 333 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 NUDT7P0C024 238 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 GP1BBP13224 206 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 CHRNB4P30926 498 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 LSP1P33241 339 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 TIMP3P35625 211 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 EIF1P41567 113 aaKnown RBP16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 KCNJ10P78508 379 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 SRYQ05066 204 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 CBFBQ13951 182 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 GNA13Q14344 377 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 RUNDC3AQ59EK9 446 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 PRAMEF8Q5VWM4 474 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 PRAMEF7Q5VXH5 474 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 DHDDSQ86SQ9 333 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 CMIPQ8IY22 773 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 POC1BQ8TC44 478 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 SDCCAG3Q96C92 435 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 TMEM19Q96HH6 336 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 UCN2Q96RP3 112 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 NPAS1Q99742 590 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 TUBA1CQ9BQE3 449 aa16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 CPPED1Q9BRF8 314 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-209ENST00000503346 QRSL1Q9H0R6 528 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms