RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 H3BNH8 94 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 CFLARO15519 480 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 TBX19O60806 448 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 PEX11AO75192 247 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 LY6G6DO95868 133 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 HMGN2P05204 90 aaKnown RBP9.6□□□□□ -0.87
SNCA-207ENST00000502987 NGFRP08138 427 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 PABPC4LP0CB38 370 aaKnown RBP9.6□□□□□ -0.87
SNCA-207ENST00000502987 BCKDHAP12694 445 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 PPP3CBP16298 524 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 MAPK1P28482 360 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 CCKARP32238 428 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 RPL3P39023 403 aaKnown RBP9.6□□□□□ -0.87
SNCA-207ENST00000502987 RNF144AP50876 292 aaPredicted RBP9.6□□□□□ -0.87
SNCA-207ENST00000502987 TP53BP2Q13625 1128 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 LASP1Q14847 261 aaKnown RBP9.6□□□□□ -0.87
SNCA-207ENST00000502987 PCLAFQ15004 111 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.6□□□□□ -0.87
SNCA-207ENST00000502987 TMEM44Q2T9K0 475 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 CTU2Q2VPK5 515 aaKnown RBP9.6□□□□□ -0.87
SNCA-207ENST00000502987 PLPPR5Q32ZL2 321 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 BEX5Q5H9J7 111 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 TMEM201Q5SNT2 666 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 MFSD12Q6NUT3 480 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 C22orf34Q6ZV56 151 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 ESPNLQ6ZVH7 1005 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 ZAR1Q86SH2 424 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 KRTAP1-3Q8IUG1 177 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 HOMEZQ8IX15 550 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 GTPBP8Q8N3Z3 284 aaPredicted RBP9.6□□□□□ -0.87
SNCA-207ENST00000502987 ZNF614Q8N883 585 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 ZNF527Q8NB42 609 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 OR7A2PQ8NGA2 310 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 RFWD2Q8NHY2 731 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 ACTRT2Q8TDY3 377 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 ADAMTS15Q8TE58 950 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 NUDT8Q8WV74 236 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 TMEM171Q8WVE6 324 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 TWIST2Q8WVJ9 160 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 ROBO4Q8WZ75 1007 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 CDS1Q92903 461 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 CAVIN3Q969G5 261 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 MTERF3Q96E29 417 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 GIMAP5Q96F15 307 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 NPAS1Q99742 590 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 BTBD2Q9BX70 525 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 TUBB1Q9H4B7 451 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 GLRX2Q9NS18 164 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 FAF1Q9UNN5 650 aaPredicted RBP9.6□□□□□ -0.87
SNCA-207ENST00000502987 DNAJC15Q9Y5T4 150 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 NPIPA5A0A0B4J1W7 369 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 LOC100996750A0A140TA64 210 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.59□□□□□ -0.87
SNCA-207ENST00000502987 TMEM233B4DJY2 109 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 NPIPA7E9PJI5 369 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 NPIPB8E9PQR5 432 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 PIP5K1BO14986 540 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 LSM1O15116 133 aaKnown RBP9.59□□□□□ -0.87
SNCA-207ENST00000502987 SS18L1O75177 396 aaPredicted RBP9.59□□□□□ -0.87
SNCA-207ENST00000502987 SPAG7O75391 227 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 SLU7O95391 586 aaKnown RBP9.59□□□□□ -0.87
SNCA-207ENST00000502987 HSPA4LO95757 839 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 HEXAP06865 529 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 TUBBP07437 444 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 CHRNGP07510 517 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 NPIPA8P0DM63 369 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 ALDH3A1P30838 453 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 LCN1P31025 176 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 MAP3K8P41279 467 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 EIF1P41567 113 aaKnown RBP9.59□□□□□ -0.87
SNCA-207ENST00000502987 FRKP42685 505 aaPredicted RBP9.59□□□□□ -0.87
SNCA-207ENST00000502987 CCT3P49368 545 aaKnown RBP9.59□□□□□ -0.87
SNCA-207ENST00000502987 IFFO1Q0D2I5 559 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 PDE7AQ13946 482 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 CAPRIN1Q14444 709 aaKnown RBP9.59□□□□□ -0.87
SNCA-207ENST00000502987 GUSBP1Q15486 140 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 LSM12Q3MHD2 195 aaKnown RBP9.59□□□□□ -0.87
SNCA-207ENST00000502987 ARL13AQ5H913 290 aaPredicted RBP9.59□□□□□ -0.87
SNCA-207ENST00000502987 KANK2Q63ZY3 851 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 STAC2Q6ZMT1 411 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 ZNF704Q6ZNC4 412 aaPredicted RBP9.59□□□□□ -0.87
SNCA-207ENST00000502987 TRABD2AQ86V40 505 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 CIARTQ8N365 385 aaPredicted RBP9.59□□□□□ -0.87
SNCA-207ENST00000502987 TMCO5AQ8N6Q1 288 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 FAM110BQ8TC76 370 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 TRIM44Q96DX7 344 aaPredicted RBP9.59□□□□□ -0.87
SNCA-207ENST00000502987 FAM120BQ96EK7 910 aaKnown RBP9.59□□□□□ -0.87
SNCA-207ENST00000502987 PLPPR2Q96GM1 343 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 ZNF764Q96H86 408 aaPredicted RBP9.59□□□□□ -0.87
SNCA-207ENST00000502987 FCRL1Q96LA6 429 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 PPP3R2Q96LZ3 170 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 KLHL15Q96M94 604 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 PRPF18Q99633 342 aaKnown RBP9.59□□□□□ -0.87
SNCA-207ENST00000502987 TACO1Q9BSH4 297 aaKnown RBP9.59□□□□□ -0.87
SNCA-207ENST00000502987 MECRQ9BV79 373 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 ACTRT3Q9BYD9 372 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 KRTAP4-6Q9BYQ5 205 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 ACTR6Q9GZN1 396 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 HOXD1Q9GZZ0 328 aa9.59□□□□□ -0.87
SNCA-207ENST00000502987 ATAD3AQ9NVI7 634 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms