RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 FFAR1O14842 300 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 HS6ST1O60243 411 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 FMO6PO60774 539 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 RASAL1O95294 804 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 OXSR1O95747 527 aaPredicted RBP13.02□□□□□ -0.33
VPS26A-209ENST00000497564 ZNF23P17027 643 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 ENDOUP21128 410 aaKnown RBP13.02□□□□□ -0.33
VPS26A-209ENST00000497564 RRM2P31350 389 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 LIMS1P48059 325 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 TMED10P49755 219 aaKnown RBP13.02□□□□□ -0.33
VPS26A-209ENST00000497564 ZNF136P52737 540 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 RGS8P57771 180 aaPredicted RBP13.02□□□□□ -0.33
VPS26A-209ENST00000497564 PLAURQ03405 335 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 LRRC36Q1X8D7 754 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 BORAQ6PGQ7 559 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 ZBTB49Q6ZSB9 765 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 TMEM179BQ7Z7N9 219 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 ZDHHC13Q8IUH4 622 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 AMER2Q8N7J2 671 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 PIK3C3Q8NEB9 887 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 OR4C15Q8NGM1 316 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 OR4C3Q8NH37 302 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 SLC22A8Q8TCC7 542 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 RNF138Q8WVD3 245 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 ADOQ96SZ5 270 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 ARHGAP9Q9BRR9 750 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 ZNF160Q9HCG1 818 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 ACER3Q9NUN7 267 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 RLIMQ9NVW2 624 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 FBXL4Q9UKA2 621 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 PRDM4Q9UKN5 801 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 A4GNTQ9UNA3 340 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 SAMHD1Q9Y3Z3 626 aaKnown RBP13.02□□□□□ -0.33
VPS26A-209ENST00000497564 LYVE1Q9Y5Y7 322 aa13.02□□□□□ -0.33
VPS26A-209ENST00000497564 J3KTA2 159 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 WWP2O00308 870 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 SCDO00767 359 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 SOCS2O14508 198 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 TPST2O60704 377 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 ZNF354AO60765 605 aaPredicted RBP13.01□□□□□ -0.33
VPS26A-209ENST00000497564 UGT2B11O75310 529 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 E2F6O75461 281 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 HPRP00739 348 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 FBXO45P0C2W1 286 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 SMIM11AP58511 58 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 SPIBQ01892 262 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 H3F3CQ6NXT2 135 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 LYPD8Q6UX82 237 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 IZUMO2Q6UXV1 221 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 DEF8Q6ZN54 512 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 NUP54Q7Z3B4 507 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 ZNF440Q8IYI8 595 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 PRR22Q8IZ63 422 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 OFCC1Q8IZS5 231 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 CBR4Q8N4T8 237 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 SDCCAG3Q96C92 435 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 ZNF184Q99676 751 aaPredicted RBP13.01□□□□□ -0.33
VPS26A-209ENST00000497564 SLC29A1Q99808 456 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 PSD2Q9BQI7 771 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 TACO1Q9BSH4 297 aaKnown RBP13.01□□□□□ -0.33
VPS26A-209ENST00000497564 EXOSC3Q9NQT5 275 aaKnown RBP13.01□□□□□ -0.33
VPS26A-209ENST00000497564 DNAJB12Q9NXW2 375 aaKnown RBP13.01□□□□□ -0.33
VPS26A-209ENST00000497564 USE1Q9NZ43 259 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 TESQ9UGI8 421 aaKnown RBP13.01□□□□□ -0.33
VPS26A-209ENST00000497564 TESMINQ9Y4I5 508 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 LRRC42Q9Y546 428 aa13.01□□□□□ -0.33
VPS26A-209ENST00000497564 ARRDC5A6NEK1 342 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 ALG1L2C9J202 215 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 PDLIM1O00151 329 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 TNFRSF11BO00300 401 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 AP3D1O14617 1153 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 FADS1O60427 444 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 ICOSLGO75144 302 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 OR5F1O95221 314 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 SERPINA7P05543 415 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 CELA2AP08217 269 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 THRBP10828 461 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 YAP1P46937 504 aaKnown RBP13□□□□□ -0.33
VPS26A-209ENST00000497564 ARHGDIAP52565 204 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 IST1P53990 364 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 CDH12P55289 794 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 PPP2R2BQ00005 443 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 DAG1Q14118 895 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 NTRK2Q16620 822 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 COLEC12Q5KU26 742 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 JMJD6Q6NYC1 403 aaPredicted RBP13□□□□□ -0.33
VPS26A-209ENST00000497564 ZNF550Q7Z398 422 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 RANBP3LQ86VV4 465 aaPredicted RBP13□□□□□ -0.33
VPS26A-209ENST00000497564 DND1Q8IYX4 353 aaKnown RBP13□□□□□ -0.33
VPS26A-209ENST00000497564 ZNF614Q8N883 585 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 POGLUT1Q8NBL1 392 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 THAP3Q8WTV1 239 aaPredicted RBP13□□□□□ -0.33
VPS26A-209ENST00000497564 CNOT9Q92600 299 aaKnown RBP13□□□□□ -0.33
VPS26A-209ENST00000497564 HGDQ93099 445 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 ZNF597Q96LX8 424 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 RASL10BQ96S79 203 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 MCHR1Q99705 422 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 FUZQ9BT04 418 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 ANKRD19PQ9H560 264 aa13□□□□□ -0.33
VPS26A-209ENST00000497564 LIN28AQ9H9Z2 209 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms