RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 FIG4Q92562 907 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 SLC35G5Q96KT7 338 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 RNF145Q96MT1 663 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 THAP1Q9NVV9 213 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 PCDHGB4Q9UN71 923 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 EDARQ9UNE0 448 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 C2CD3Q4AC94 2353 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 PRRC2AP48634 2157 aaKnown RBP14.13□□□□□ -0.15
HDAC4-213ENST00000496347 PRSS51A0A1B0GVH4 220 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 TRPC5OSA6NMA1 111 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 A8MXE2 369 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 SHISA8B8ZZ34 492 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 EIF1AYO14602 144 aaKnown RBP14.13□□□□□ -0.15
HDAC4-213ENST00000496347 ADAMDEC1O15204 470 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 SNNO75324 88 aaPredicted RBP14.13□□□□□ -0.15
HDAC4-213ENST00000496347 AGR2O95994 175 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 LINGO3P0C6S8 592 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 DNAJA1P31689 397 aaKnown RBP14.13□□□□□ -0.15
HDAC4-213ENST00000496347 EIF1AXP47813 144 aaKnown RBP14.13□□□□□ -0.15
HDAC4-213ENST00000496347 WDR4P57081 412 aaKnown RBP14.13□□□□□ -0.15
HDAC4-213ENST00000496347 RPS26P62854 115 aaKnown RBP14.13□□□□□ -0.15
HDAC4-213ENST00000496347 CTU2Q2VPK5 515 aaKnown RBP14.13□□□□□ -0.15
HDAC4-213ENST00000496347 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.13□□□□□ -0.15
HDAC4-213ENST00000496347 TOR1AIP2Q8NFQ8 470 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 OR10D3Q8NH80 312 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 PHOSPHO1Q8TCT1 267 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 STARD4Q96DR4 205 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 ZNF845Q96IR2 970 aaPredicted RBP14.13□□□□□ -0.15
HDAC4-213ENST00000496347 ADGRG7Q96K78 797 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 ZNF350Q9GZX5 532 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 SERHL2Q9H4I8 314 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 NKIRAS1Q9NYS0 192 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 ITGB1BP2Q9UKP3 347 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 MCTS1Q9ULC4 181 aaKnown RBP14.13□□□□□ -0.15
HDAC4-213ENST00000496347 ICAM5Q9UMF0 924 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 TESMINQ9Y4I5 508 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 DTNAQ9Y4J8 743 aa14.13□□□□□ -0.15
HDAC4-213ENST00000496347 SH3D21A4FU49 640 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 GJE1A6NN92 205 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 SLCO1B7G3V0H7 640 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 SDHDO14521 159 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 HDAC3O15379 428 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 SCN2BO60939 215 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 STX11O75558 287 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 SMNDC1O75940 238 aaKnown RBP eCLIP14.12□□□□□ -0.15
HDAC4-213ENST00000496347 GUSBP08236 651 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 CD8BP10966 210 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 CD1EP15812 388 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 ADH6P28332 368 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 KIR2DL2P43627 348 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-213ENST00000496347 P2RX1P51575 399 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 FOXF1Q12946 379 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 SGCBQ16585 318 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 FAM174BQ3ZCQ3 159 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 SPANXN4Q5MJ08 99 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 BEND6Q5SZJ8 279 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-213ENST00000496347 ATG16L1Q676U5 607 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 VWA1Q6PCB0 445 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 C16orf62Q7Z3J2 963 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 C6orf120Q7Z4R8 191 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 OR2V1Q8NHB1 315 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 CCDC115Q96NT0 180 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 SDF2Q99470 211 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 EXD2Q9NVH0 621 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 PNPOQ9NVS9 261 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 AIG1Q9NVV5 245 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 EMC9Q9Y3B6 208 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 GPC6Q9Y625 555 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-213ENST00000496347 KCNE3Q9Y6H6 103 aa14.12□□□□□ -0.15
HDAC4-213ENST00000496347 FLNAP21333 2647 aaKnown RBP14.12□□□□□ -0.15
HDAC4-213ENST00000496347 NPIPA5A0A0B4J1W7 369 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 NPIPA7E9PJI5 369 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 KIAA0513O60268 411 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 AQP8O94778 261 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 NUDT14O95848 222 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 ALDOCP09972 364 aaKnown RBP14.11□□□□□ -0.15
HDAC4-213ENST00000496347 NPIPA8P0DM63 369 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 UBL4AP11441 157 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 MATN1P21941 496 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 UQCRC2P22695 453 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 CD79BP40259 229 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 KHKP50053 298 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 MAGOHP61326 146 aaKnown RBP14.11□□□□□ -0.15
HDAC4-213ENST00000496347 SIRPAP78324 504 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 TXNL4AP83876 142 aaKnown RBP14.11□□□□□ -0.15
HDAC4-213ENST00000496347 LRRC74AQ0VAA2 488 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 CASP8Q14790 479 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 PDSS1Q5T2R2 415 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 ATAD3BQ5T9A4 648 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 FBXW10Q5XX13 1052 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 HEPHL1Q6MZM0 1159 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 FAM214BQ7L5A3 538 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 SPATA19Q7Z5L4 167 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 BTLAQ7Z6A9 289 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 ANKRD46Q86W74 232 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 CDC20BQ86Y33 519 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 ZNF614Q8N883 585 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 MGARPQ8TDB4 240 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 TLCD1Q96CP7 247 aa14.11□□□□□ -0.15
HDAC4-213ENST00000496347 NEURL3Q96EH8 262 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms