RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 ZNF440Q8IYI8 595 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 COMMD1Q8N668 190 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 C4orf32Q8N8J7 132 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 C17orf47Q8NEP4 570 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 SPATA4Q8NEY3 305 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 OR4C5Q8NGB2 326 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 DNAJA4Q8WW22 397 aaPredicted RBP2.93□□□□□ -1.94
CLK1-214ENST00000496205 AKR1E2Q96JD6 320 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 RBM14Q96PK6 669 aaKnown RBP2.93□□□□□ -1.94
CLK1-214ENST00000496205 BCL7BQ9BQE9 202 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 RPP25Q9BUL9 199 aaKnown RBP2.93□□□□□ -1.94
CLK1-214ENST00000496205 GSDMCQ9BYG8 508 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 POLR3FQ9H1D9 316 aaPredicted RBP2.93□□□□□ -1.94
CLK1-214ENST00000496205 EHD1Q9H4M9 534 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 RNF41Q9H4P4 317 aaPredicted RBP2.93□□□□□ -1.94
CLK1-214ENST00000496205 XKR8Q9H6D3 395 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 NEK6Q9HC98 313 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 ESM1Q9NQ30 184 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 MEPEQ9NQ76 525 aaPredicted RBP2.93□□□□□ -1.94
CLK1-214ENST00000496205 ZNHIT6Q9NWK9 470 aaKnown RBP2.93□□□□□ -1.94
CLK1-214ENST00000496205 UTP6Q9NYH9 597 aaKnown RBP2.93□□□□□ -1.94
CLK1-214ENST00000496205 PIPOXQ9P0Z9 390 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 ZMAT5Q9UDW3 170 aaKnown RBP2.93□□□□□ -1.94
CLK1-214ENST00000496205 SEC14L3Q9UDX4 400 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 KLK13Q9UKR3 277 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 MGAT4AQ9UM21 535 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 CA5BQ9Y2D0 317 aa2.93□□□□□ -1.94
CLK1-214ENST00000496205 TNIKQ9UKE5 1360 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 A0A1B0GTH9 108 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 TTC26A0AVF1 554 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 HEATR9A2RTY3 570 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 FOXI3A8MTJ6 420 aaPredicted RBP2.92□□□□□ -1.94
CLK1-214ENST00000496205 TCP11X1B4DZS4 312 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 EI24O14681 340 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 CFLARO15519 480 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 OTCP00480 354 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 KRT6AP02538 564 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 HOXD4P09016 255 aaPredicted RBP2.92□□□□□ -1.94
CLK1-214ENST00000496205 HOXB7P09629 217 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 UBTFL6P0CB48 400 aaPredicted RBP2.92□□□□□ -1.94
CLK1-214ENST00000496205 TRIM49P0CI25 452 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 TRIM49CP0CI26 452 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 CAPN2P17655 700 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 CD9P21926 228 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 HOXD10P28358 340 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 HMGCLP35914 325 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 SYKP43405 635 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 RIDAP52758 137 aaKnown RBP2.92□□□□□ -1.94
CLK1-214ENST00000496205 OSTNP61366 133 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 MAP2K1Q02750 393 aaPredicted RBP2.92□□□□□ -1.94
CLK1-214ENST00000496205 LTB4RQ15722 352 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 STK11Q15831 433 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 LINC01620Q4KN68 170 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 BCL7AQ4VC05 210 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 C14orf28Q4W4Y0 310 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 FBXO48Q5FWF7 155 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 ZNF506Q5JVG8 444 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 CTSL3PQ5NE16 218 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 ATF7IP2Q5U623 682 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 CENPQQ7L2Z9 268 aaPredicted RBP2.92□□□□□ -1.94
CLK1-214ENST00000496205 P4HA3Q7Z4N8 544 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 ECHDC2Q86YB7 292 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 EFCAB13Q8IY85 973 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 CENPSQ8N2Z9 138 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 SPERTQ8NA61 448 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 DRAXINQ8NBI3 349 aaPredicted RBP2.92□□□□□ -1.94
CLK1-214ENST00000496205 OR6T1Q8NGN1 323 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 C7orf34Q96L11 122 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 NPAS2Q99743 824 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 FAM173AQ9BQD7 235 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 NUP58Q9BVL2 599 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 GON7Q9BXV9 100 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 HEXA-AS1Q9H8Q6 139 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 DCAF13Q9NV06 445 aaKnown RBP2.92□□□□□ -1.94
CLK1-214ENST00000496205 SEC14L4Q9UDX3 406 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 SUN2Q9UH99 717 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 CDH9Q9ULB4 789 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 KIAA1257Q9ULG3 409 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 PIGLQ9Y2B2 252 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 AUP1Q9Y679 476 aa2.92□□□□□ -1.94
CLK1-214ENST00000496205 PNPLA6Q8IY17 1366 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 CCDC7Q96M83 1385 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 LOC100653049A0A140TA62 436 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 ESYT2A0FGR8 921 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 BCLAF3A2AJT9 711 aaKnown RBP2.91□□□□□ -1.94
CLK1-214ENST00000496205 RNF113AO15541 343 aaKnown RBP2.91□□□□□ -1.94
CLK1-214ENST00000496205 PHF1O43189 567 aaPredicted RBP2.91□□□□□ -1.94
CLK1-214ENST00000496205 ZSCAN12O43309 604 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 KRT34O76011 436 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 ALPIP09923 528 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 XRCC1P18887 633 aaPredicted RBP2.91□□□□□ -1.94
CLK1-214ENST00000496205 NT5EP21589 574 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 SPRP35270 261 aaPredicted RBP2.91□□□□□ -1.94
CLK1-214ENST00000496205 FNTAP49354 379 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 MFAP2P55001 183 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 FCHO2Q0JRZ9 810 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 DOC2AQ14183 400 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 NHLRC3Q5JS37 347 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 PYHIN1Q6K0P9 492 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 PRR5LQ6MZQ0 368 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms