RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 NCF1CA8MVU1 366 aaPredicted RBP7.59□□□□□ -1.19
GARNL3-219ENST00000495172 J3QL48 77 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 TO15178 435 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 PFDN6O15212 129 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 CDC14BO60729 498 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 SLITRK5O94991 958 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 NDUFA7O95182 113 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 IFNB1P01574 187 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 CRYBA1P05813 215 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 NCF1P14598 390 aaPredicted RBP7.59□□□□□ -1.19
GARNL3-219ENST00000495172 PIK3R1P27986 724 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 TIA1P31483 386 aaKnown RBP eCLIP7.59□□□□□ -1.19
GARNL3-219ENST00000495172 RGS4P49798 205 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 SEC24CP53992 1094 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 AP1S2P56377 157 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 TUBA1BP68363 451 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 TUBA4AP68366 448 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 MYL5Q02045 173 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 CSTF3Q12996 717 aaKnown RBP7.59□□□□□ -1.19
GARNL3-219ENST00000495172 BIKQ13323 160 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 RNPS1Q15287 305 aaKnown RBP7.59□□□□□ -1.19
GARNL3-219ENST00000495172 SLC18A3Q16572 532 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 ARL13AQ5H913 290 aaPredicted RBP7.59□□□□□ -1.19
GARNL3-219ENST00000495172 ZNF362Q5T0B9 420 aaPredicted RBP7.59□□□□□ -1.19
GARNL3-219ENST00000495172 ESPNLQ6ZVH7 1005 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 TUBA1AQ71U36 451 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 R3HCC1LQ7Z5L2 792 aaKnown RBP7.59□□□□□ -1.19
GARNL3-219ENST00000495172 MYPOPQ86VE0 399 aaPredicted RBP7.59□□□□□ -1.19
GARNL3-219ENST00000495172 LILRA2Q8N149 483 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 GBP7Q8N8V2 638 aaPredicted RBP7.59□□□□□ -1.19
GARNL3-219ENST00000495172 GATSQ8NAP1 163 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 CKAP2Q8WWK9 683 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 EGFL8Q99944 293 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 MS4A7Q9GZW8 240 aaPredicted RBP7.59□□□□□ -1.19
GARNL3-219ENST00000495172 PTGES2Q9H7Z7 377 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 NT5DC2Q9H857 520 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 COQ10BQ9H8M1 238 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 SIRT3Q9NTG7 399 aaPredicted RBP7.59□□□□□ -1.19
GARNL3-219ENST00000495172 PHF11Q9UIL8 331 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 U3KQK5 164 aa7.59□□□□□ -1.19
GARNL3-219ENST00000495172 A0A1W2PNR3 127 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 TCRBV7S3A2A0A539 114 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 C1orf226A1L170 272 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 ERI2A8K979 691 aaKnown RBP7.58□□□□□ -1.2
GARNL3-219ENST00000495172 LCE2BO14633 110 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 PIP5K1BO14986 540 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 ERAL1O75616 437 aaKnown RBP7.58□□□□□ -1.2
GARNL3-219ENST00000495172 IGHV2-5P01817 119 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 FAM58BPP0C7Q3 252 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 CD1DP15813 335 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 EPORP19235 508 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 SLC1A3P43003 542 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 ALDH3B1P43353 468 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 MANFP55145 182 aaKnown RBP7.58□□□□□ -1.2
GARNL3-219ENST00000495172 RAC1P63000 192 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 HGFACQ04756 655 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 EFR3AQ14156 821 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 MAD2L1BPQ15013 274 aaPredicted RBP7.58□□□□□ -1.2
GARNL3-219ENST00000495172 ASTE1Q2TB18 679 aaPredicted RBP7.58□□□□□ -1.2
GARNL3-219ENST00000495172 DEFB112Q30KQ8 113 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 HIKESHIQ53FT3 197 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 C4orf48Q5BLP8 95 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 MRM1Q6IN84 353 aaKnown RBP7.58□□□□□ -1.2
GARNL3-219ENST00000495172 MUS81Q96NY9 551 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 TRIM54Q9BYV2 358 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 SLC17A5Q9NRA2 495 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 FAM120CQ9NX05 1096 aaKnown RBP7.58□□□□□ -1.2
GARNL3-219ENST00000495172 PAQR5Q9NXK6 330 aaPredicted RBP7.58□□□□□ -1.2
GARNL3-219ENST00000495172 ZNF639Q9UID6 485 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 SOX13Q9UN79 622 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 DOCK11Q5JSL3 2073 aa7.58□□□□□ -1.2
GARNL3-219ENST00000495172 A0A0A6YYD5 115 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 CCDC151A5D8V7 595 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 TAPBPO15533 448 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 RP2O75695 350 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 TTC4O95801 387 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 ERCC1P07992 297 aaPredicted RBP7.57□□□□□ -1.2
GARNL3-219ENST00000495172 CELA3BP08861 270 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 CDH2P19022 906 aaPredicted RBP7.57□□□□□ -1.2
GARNL3-219ENST00000495172 GABRB3P28472 473 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 RFX3P48380 749 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 RNF144AP50876 292 aaPredicted RBP7.57□□□□□ -1.2
GARNL3-219ENST00000495172 RAP1GDS1P52306 607 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 KRTAP10-11P60412 298 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 GLYR1Q49A26 553 aaPredicted RBP7.57□□□□□ -1.2
GARNL3-219ENST00000495172 C6orf163Q5TEZ5 329 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 FBXW9Q5XUX1 488 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 ZFAND6Q6FIF0 208 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 SLC44A2Q8IWA5 706 aaPredicted RBP7.57□□□□□ -1.2
GARNL3-219ENST00000495172 RHOT2Q8IXI1 618 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 GTPBP8Q8N3Z3 284 aaPredicted RBP7.57□□□□□ -1.2
GARNL3-219ENST00000495172 CDYL2Q8N8U2 506 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 MUC7Q8TAX7 377 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 SLC35B2Q8TB61 432 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 ALG3Q92685 438 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 ZNF669Q96BR6 464 aaPredicted RBP7.57□□□□□ -1.2
GARNL3-219ENST00000495172 DNAJA3Q96EY1 480 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 MRGPRX4Q96LA9 322 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 B9D2Q9BPU9 175 aa7.57□□□□□ -1.2
GARNL3-219ENST00000495172 TMEM79Q9BSE2 394 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms