RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 KAT8Q9H7Z6 458 aaKnown RBP10.09□□□□□ -0.79
APTX-230ENST00000494649 PLSCR2Q9NRY7 297 aa10.09□□□□□ -0.79
APTX-230ENST00000494649 RYDENQ9NUL5 291 aaKnown RBP10.09□□□□□ -0.79
APTX-230ENST00000494649 MRGBPQ9NV56 204 aa10.09□□□□□ -0.79
APTX-230ENST00000494649 ARL8BQ9NVJ2 186 aa10.09□□□□□ -0.79
APTX-230ENST00000494649 GTF3C1Q12789 2109 aa10.09□□□□□ -0.79
APTX-230ENST00000494649 POLEQ07864 2286 aa10.09□□□□□ -0.79
APTX-230ENST00000494649 A0A1W2PQD3 144 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 AGAP5A6NIR3 686 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 KDM4EB2RXH2 506 aaPredicted RBP10.08□□□□□ -0.8
APTX-230ENST00000494649 SLC22A2O15244 555 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 ZNF264O43296 627 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 FRS3O43559 492 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 ADAM11O75078 769 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 PGM3O95394 542 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 GKN3PP0CG01 181 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 RNF224P0DH78 156 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 PEPDP12955 493 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 PPIBP23284 216 aaKnown RBP10.08□□□□□ -0.8
APTX-230ENST00000494649 SRD5A2P31213 254 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 DSCR4P56555 118 aaPredicted RBP10.08□□□□□ -0.8
APTX-230ENST00000494649 KCNJ10P78508 379 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 KCNC4Q03721 635 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 SRSF1Q07955 248 aaKnown RBP eCLIP10.08□□□□□ -0.8
APTX-230ENST00000494649 ART3Q13508 389 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 GXYLT1Q4G148 440 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 EMC4Q5J8M3 183 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 MRPL2Q5T653 305 aaKnown RBP10.08□□□□□ -0.8
APTX-230ENST00000494649 PTOV1Q86YD1 416 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 DOLPP1Q86YN1 238 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 ATP6V1C2Q8NEY4 427 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 OR52P1PQ8NH57 321 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 WDR60Q8WVS4 1066 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 CNOT9Q92600 299 aaKnown RBP10.08□□□□□ -0.8
APTX-230ENST00000494649 ECSITQ9BQ95 431 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 UGT2B28Q9BY64 529 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 SAP130Q9H0E3 1048 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 ACKR4Q9NPB9 350 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 A4GALTQ9NPC4 353 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 MED17Q9NVC6 651 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 ERRFI1Q9UJM3 462 aaPredicted RBP10.08□□□□□ -0.8
APTX-230ENST00000494649 ICAM5Q9UMF0 924 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 CCL21O00585 134 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 PRRG2O14669 202 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 SEC14L5O43304 696 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 SUSD5O60279 629 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 DCTN3O75935 186 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 ARAFP10398 606 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 IL11P20809 199 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 SLC6A2P23975 617 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 LCN1P31025 176 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 ZNF41P51814 821 aaPredicted RBP10.08□□□□□ -0.8
APTX-230ENST00000494649 HOXC5Q00444 222 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 SKP2Q13309 424 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 FGFBP1Q14512 234 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 ZNF630Q2M218 657 aaPredicted RBP10.08□□□□□ -0.8
APTX-230ENST00000494649 BNC2Q6ZN30 1099 aaPredicted RBP10.08□□□□□ -0.8
APTX-230ENST00000494649 ZNF836Q6ZNA1 936 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 EIF3MQ7L2H7 374 aaKnown RBP10.08□□□□□ -0.8
APTX-230ENST00000494649 PEX5LQ8IYB4 626 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 SMYD1Q8NB12 490 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 FAM57AQ8TBR7 257 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 ABTB1Q969K4 478 aaPredicted RBP10.08□□□□□ -0.8
APTX-230ENST00000494649 CMTM5Q96DZ9 223 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 TIMP4Q99727 224 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 RSPO3Q9BXY4 272 aaPredicted RBP10.08□□□□□ -0.8
APTX-230ENST00000494649 MTHFD2LQ9H903 347 aaPredicted RBP10.08□□□□□ -0.8
APTX-230ENST00000494649 GID8Q9NWU2 228 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 CORO2BQ9UQ03 480 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 CAMK2AQ9UQM7 478 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 ZNF337Q9Y3M9 751 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 HIVEP3Q5T1R4 2406 aa10.08□□□□□ -0.8
APTX-230ENST00000494649 AQP7O14520 342 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 AP3D1O14617 1153 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 AGFG2O95081 481 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 BMP2P12643 396 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 PGM1P36871 562 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 P2RX1P51575 399 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 SLC7A2P52569 658 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 CRYZQ08257 329 aaKnown RBP10.07□□□□□ -0.8
APTX-230ENST00000494649 FOXF1Q12946 379 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 GLIPR1L2Q4G1C9 344 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 COQ5Q5HYK3 327 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 ZNF311Q5JNZ3 666 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 COMTD1Q86VU5 262 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 ZZZ3Q8IYH5 903 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 CLIP4Q8N3C7 705 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 RNF148Q8N7C7 305 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 RNF145Q96MT1 663 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 OR2B2Q9GZK3 357 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 EFCAB1Q9HAE3 211 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 POLE3Q9NRF9 147 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 CMTM6Q9NX76 183 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 QPCTLQ9NXS2 382 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 ZNF443Q9Y2A4 671 aaPredicted RBP10.07□□□□□ -0.8
APTX-230ENST00000494649 DSPPQ9NZW4 1301 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 MYO7BQ6PIF6 2116 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 HEATR5AQ86XA9 2040 aa10.07□□□□□ -0.8
APTX-230ENST00000494649 A0A1B0GVC2 190 aa10.06□□□□□ -0.8
APTX-230ENST00000494649 OR2M5A3KFT3 312 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms