RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 RHCGQ9UBD6 479 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 MRPS2Q9Y399 296 aaKnown RBP9.29□□□□□ -0.92
PRPF3-206ENST00000493553 HEMK1Q9Y5R4 338 aaPredicted RBP9.29□□□□□ -0.92
PRPF3-206ENST00000493553 FANCMQ8IYD8 2048 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 SNRNP200O75643 2136 aaKnown RBP9.28□□□□□ -0.92
PRPF3-206ENST00000493553 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 CLDN24A6NM45 220 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 B4GAT1O43505 415 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 FOXS1O43638 330 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 LDB3O75112 727 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 RCBTB2O95199 551 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 HTR1AP08908 422 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 HBQ1P09105 142 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 EPHA2P29317 976 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 CNR2P34972 360 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 RBM34P42696 430 aaKnown RBP9.28□□□□□ -0.92
PRPF3-206ENST00000493553 GIPRP48546 466 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 GSSP48637 474 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 FNTBP49356 437 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 PCYT1AP49585 367 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 ACY1Q03154 408 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 OCA2Q04671 838 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 FUT7Q11130 342 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 DCTN2Q13561 401 aaKnown RBP9.28□□□□□ -0.92
PRPF3-206ENST00000493553 C1DQ13901 141 aaKnown RBP9.28□□□□□ -0.92
PRPF3-206ENST00000493553 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.28□□□□□ -0.92
PRPF3-206ENST00000493553 LCE3BQ5TA77 95 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 PLAG1Q6DJT9 500 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 SLC27A4Q6P1M0 643 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 MBOAT2Q6ZWT7 520 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 AHSA2Q719I0 299 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 P2RY8Q86VZ1 359 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 VRK2Q86Y07 508 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 CCDC71Q8IV32 467 aaPredicted RBP9.28□□□□□ -0.92
PRPF3-206ENST00000493553 TMEFF1Q8IYR6 380 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 ZNF527Q8NB42 609 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 OR5T3Q8NGG3 340 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 OR9Q1Q8NGQ5 310 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 OR51Q1Q8NH59 317 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 WDR36Q8NI36 951 aaKnown RBP9.28□□□□□ -0.92
PRPF3-206ENST00000493553 CEP76Q8TAP6 659 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 FAR1Q8WVX9 515 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 SLC41A3Q96GZ6 507 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 CCDC120Q96HB5 630 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 PLEKHA8Q96JA3 519 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 CCDC74BQ96LY2 380 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 HHATLQ9HCP6 504 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 CHCHD3Q9NX63 227 aaKnown RBP9.28□□□□□ -0.92
PRPF3-206ENST00000493553 KLHL3Q9UH77 587 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 ENPP5Q9UJA9 477 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 MKLN1Q9UL63 735 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.28□□□□□ -0.92
PRPF3-206ENST00000493553 BAIAP2Q9UQB8 552 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 ERGIC3Q9Y282 383 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 KCNE3Q9Y6H6 103 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 RNF215Q9Y6U7 377 aa9.28□□□□□ -0.92
PRPF3-206ENST00000493553 PLXND1Q9Y4D7 1925 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 A0A087WUU8 490 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 CDHR4A6H8M9 788 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 EFCAB7A8K855 629 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 DSCR3O14972 297 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 POLR1CO15160 346 aaPredicted RBP9.27□□□□□ -0.93
PRPF3-206ENST00000493553 FCMRO60667 390 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 GABARAPO95166 117 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 MT-ND2P03891 347 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 IFNA16P05015 189 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 CYC1P08574 325 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 ANKRD34CP0C6C1 535 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 POU2F1P14859 743 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 TNNI3P19429 210 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 DRD5P21918 477 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 MMP11P24347 488 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 ACVR2AP27037 513 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 PSMB9P28065 219 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 CD1CP29017 333 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 CAPZA2P47755 286 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 ATP12AP54707 1039 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 ST3GAL4Q11206 333 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 TMED1Q13445 227 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 ZNF267Q14586 743 aaPredicted RBP9.27□□□□□ -0.93
PRPF3-206ENST00000493553 SEC23BQ15437 767 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 NR0B2Q15466 257 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 GPR68Q15743 365 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 ZNF141Q15928 474 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 DGUOKQ16854 277 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 FLYWCH1Q4VC44 716 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 ARMC4Q5T2S8 1044 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 ZNF836Q6ZNA1 936 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 GDPGP1Q6ZNW5 385 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 QSOX2Q6ZRP7 698 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 PRSS41Q7RTY9 318 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 ZER1Q7Z7L7 766 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 MRGPREQ86SM8 312 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 RBM45Q8IUH3 476 aaKnown RBP9.27□□□□□ -0.93
PRPF3-206ENST00000493553 DEFB119Q8N690 84 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 OR52R1Q8NGF1 315 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 OR4D11Q8NGI4 311 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 APH1BQ8WW43 257 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 GGHQ92820 318 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 VSTM2LQ96N03 204 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms