RNA–Protein interactions for RNA: ENST00000490363.3

KCNT1-210, Transcript of potassium sodium-activated channel subfamily T member 1, human

TSL 5

Gene KCNT1, Length 4,065 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNT1-210	ENST00000490363	LIPT1	Q9Y234	373 aa		12.09	□□□□□ -0.47
KCNT1-210	ENST00000490363	HCN4	Q9Y3Q4	1203 aa		12.09	□□□□□ -0.47
KCNT1-210	ENST00000490363	TRAV6	A0A075B6T7	132 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	OR2A25	A4D2G3	310 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	NUDT21	O43809	227 aa	Known RBP	12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	GALR3	O60755	368 aa	Predicted RBP	12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	GADD45A	P24522	165 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	GUCA1A	P43080	201 aa	Predicted RBP	12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	ZNF81	P51508	661 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	AP2S1	P53680	142 aa	Predicted RBP	12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	RAE1	P78406	368 aa	Known RBP	12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	OXA1L	Q15070	435 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	NKAIN1	Q4KMZ8	207 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	AGAP7P	Q5VUJ5	663 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	GARNL3	Q5VVW2	1013 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	NRARP	Q7Z6K4	114 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	SLC25A45	Q8N413	288 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	IQCF1	Q8N6M8	205 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	DPCD	Q9BVM2	203 aa	Predicted RBP	12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	PRDM7	Q9NQW5	492 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	SPIN1	Q9Y657	262 aa	Predicted RBP	12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	BLOC1S5-TXNDC5	H3BN57	136 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	UPK1B	O75841	260 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	PRR35	P0CG20	571 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	POU3F3	P20264	500 aa	Predicted RBP	12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	RBMS1	P29558	406 aa	Known RBP	12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	EVI2B	P34910	448 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	RAB38	P57729	211 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	ST3GAL4	Q11206	333 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	CDK5R2	Q13319	367 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	LAPTM4B	Q86VI4	370 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	CDRT4	Q8N9R6	151 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	ZNF527	Q8NB42	609 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	SENP5	Q96HI0	755 aa	Predicted RBP	12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	YTHDF1	Q9BYJ9	559 aa	Known RBP	12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	SLC22A4	Q9H015	551 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	MLX	Q9UH92	298 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	SMLR1	H3BR10	107 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	CTDSP2	O14595	271 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	PROM1	O43490	865 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	OR5F1	O95221	314 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	HOXC4	P09017	264 aa	Predicted RBP	12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	PEBP1	P30086	187 aa	Known RBP	12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	SERTAD2	Q14140	314 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	EIPR1	Q53HC9	387 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	CPZ	Q66K79	652 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	PAMR1	Q6UXH9	720 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	SERPINA11	Q86U17	422 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	SUN3	Q8TAQ9	357 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	IFT27	Q9BW83	186 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	ITPA	Q9BY32	194 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	CPNE5	Q9HCH3	593 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	ACSS1	Q9NUB1	689 aa	Predicted RBP	12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	POFUT2	Q9Y2G5	429 aa		12.08	□□□□□ -0.48
KCNT1-210	ENST00000490363	SHISA7	A6NL88	538 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363		A8MVJ9	347 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	MCIDAS	D6RGH6	385 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	PCDH17	O14917	1159 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	TCN2	P20062	427 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	C21orf33	P30042	268 aa	Predicted RBP	12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	TRA2B	P62995	288 aa	Known RBP	12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	SELENOW	P63302	87 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	POU4F3	Q15319	338 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	PMS2CL	Q68D20	193 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	MSANTD1	Q6ZTZ1	278 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	TMEM179B	Q7Z7N9	219 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	ZNF433	Q8N7K0	673 aa	Predicted RBP	12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	DIO2	Q92813	273 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	MOAP1	Q96BY2	351 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	CCDC74B	Q96LY2	380 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	FYTTD1	Q96QD9	318 aa	Known RBP	12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	RACGAP1	Q9H0H5	632 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	PCED1A	Q9H1Q7	454 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	ANKRD10	Q9NXR5	420 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	C2orf72	A6NCS6	295 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	HCN1	O60741	890 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	CXCR1	P25024	350 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	DCD	P81605	110 aa	Known RBP	12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	AGER	Q15109	404 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	ZIC1	Q15915	447 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	FCRL6	Q6DN72	434 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	SHQ1	Q6PI26	577 aa	Known RBP	12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	SPRED1	Q7Z699	444 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	C10orf111	Q8N326	155 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	ZNF248	Q8NDW4	579 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	CHDH	Q8NE62	594 aa	Predicted RBP	12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	TOR1AIP2	Q8NFQ8	470 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	ZNF431	Q8TF32	576 aa	Predicted RBP	12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	POP5	Q969H6	163 aa	Known RBP	12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	KIAA1143	Q96AT1	154 aa	Predicted RBP	12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	TUBA1C	Q9BQE3	449 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	MCUB	Q9NWR8	336 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	CHD9	Q3L8U1	2897 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	PRAMEF2	O60811	474 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	ITGA3	P26006	1051 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	ST3GAL3	Q11203	375 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	LCN1P1	Q5VSP4	162 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	AGAP6	Q5VW22	663 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	MSRB3	Q8IXL7	192 aa		12.07	□□□□□ -0.48
KCNT1-210	ENST00000490363	SPERT	Q8NA61	448 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms