RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 TEFMQ96QE5 360 aaKnown RBP12.76□□□□□ -0.37
COPS7B-221ENST00000488111 POLR2J2Q9GZM3 115 aaKnown RBP12.76□□□□□ -0.37
COPS7B-221ENST00000488111 HEXA-AS1Q9H8Q6 139 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 THSD1Q9NS62 852 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 FAM120CQ9NX05 1096 aaKnown RBP12.76□□□□□ -0.37
COPS7B-221ENST00000488111 EPHA6Q9UF33 1036 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 RPS10-NUDT3A0A1W2PQS6 291 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 TLCD2A6NGC4 264 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 PCDH17O14917 1159 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 PRMT3O60678 531 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 CPSF4O95639 269 aaKnown RBP12.76□□□□□ -0.37
COPS7B-221ENST00000488111 RAF1P04049 648 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 TNFRSF1BP20333 461 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 AQP1P29972 269 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 CRISP1P54107 249 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 TAS2R50P59544 299 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 PPP3R1P63098 170 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 RIN1Q13671 783 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 KCNAB1Q14722 419 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 AANATQ16613 207 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 IFI44LQ53G44 452 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 TMEM201Q5SNT2 666 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 OR4C11Q6IEV9 310 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 KLHL17Q6TDP4 642 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 METAP1DQ6UB28 335 aaPredicted RBP12.76□□□□□ -0.37
COPS7B-221ENST00000488111 ZNF793Q6ZN11 406 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 COMMD7Q86VX2 200 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 PLXDC1Q8IUK5 500 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 CLECL1Q8IZS7 167 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 MMP21Q8N119 569 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 Q8N402 240 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 OR8J2Q8NGG1 315 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 OR8K5Q8NH50 307 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 AP3S1Q92572 193 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 TM4SF19Q96DZ7 209 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 METTL2AQ96IZ6 378 aaKnown RBP12.76□□□□□ -0.37
COPS7B-221ENST00000488111 KCNJ15Q99712 375 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 PIGUQ9H490 435 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 B3GAT2Q9NPZ5 323 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 PHF11Q9UIL8 331 aa12.76□□□□□ -0.37
COPS7B-221ENST00000488111 RP1P56715 2156 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 A0A1W2PQM1 296 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 PRAMEF25A6NGN4 478 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 ATP6V1G2-DDX39BF2Z307 99 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 INMT-MINDY4F8WBC2 141 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 FABP7O15540 132 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 SLC35G6P0C7Q6 338 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 HK1P19367 917 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 PTBP1P26599 531 aaKnown RBP eCLIP12.75□□□□□ -0.372e-14■■■■■ 29.7
COPS7B-221ENST00000488111 SDC2P34741 201 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 SSR2P43308 183 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 GALEQ14376 348 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 ZNF267Q14586 743 aaPredicted RBP12.75□□□□□ -0.37
COPS7B-221ENST00000488111 LIPKQ5VXJ0 399 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 ABHD17CQ6PCB6 329 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 PRSS42Q7Z5A4 293 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 MCATQ8IVS2 390 aaKnown RBP12.75□□□□□ -0.37
COPS7B-221ENST00000488111 IFI44Q8TCB0 444 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 C16orf78Q8WTQ4 265 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 GTPBP3Q969Y2 492 aaKnown RBP12.75□□□□□ -0.37
COPS7B-221ENST00000488111 CREB3L1Q96BA8 519 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 TMEM43Q9BTV4 400 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 SLC6A16Q9GZN6 736 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 RAB33BQ9H082 229 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 TNFRSF10DQ9UBN6 386 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 MRPS2Q9Y399 296 aaKnown RBP12.75□□□□□ -0.37
COPS7B-221ENST00000488111 CDH10Q9Y6N8 788 aa12.75□□□□□ -0.37
COPS7B-221ENST00000488111 MDC1Q14676 2089 aaKnown RBP12.75□□□□□ -0.37
COPS7B-221ENST00000488111 CIB4A0PJX0 185 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 SGK494L7N484 410 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 CDX4O14627 284 aaPredicted RBP12.74□□□□□ -0.37
COPS7B-221ENST00000488111 TMPRSS11DO60235 418 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 ZNF888P0CJ79 500 aaPredicted RBP12.74□□□□□ -0.37
COPS7B-221ENST00000488111 HMGA2P52926 109 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 BTG1P62324 171 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 ZNF763Q0D2J5 394 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 CLLU1Q5K131 121 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 GPR139Q6DWJ6 353 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 TRIM40Q6P9F5 258 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 ZNF730Q6ZMV8 503 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 PLEKHM3Q6ZWE6 761 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 NUDT13Q86X67 352 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 OR2L5Q8NG80 312 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 OR6C4Q8NGE1 309 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 RHBDD1Q8TEB9 315 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 ZNF431Q8TF32 576 aaPredicted RBP12.74□□□□□ -0.37
COPS7B-221ENST00000488111 MAL2Q969L2 176 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 PMEPA1Q969W9 287 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 TCTN2Q96GX1 697 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 GFM1Q96RP9 751 aaKnown RBP12.74□□□□□ -0.37
COPS7B-221ENST00000488111 KATNB1Q9BVA0 655 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 PRDM7Q9NQW5 492 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 EXO1Q9UQ84 846 aaKnown RBP12.74□□□□□ -0.37
COPS7B-221ENST00000488111 C1orf226A1L170 272 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 ARRDC5A6NEK1 342 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 IL3P08700 152 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 ZNF806P0C7X5 589 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 POU2F1P14859 743 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 PNLIPP16233 465 aa12.74□□□□□ -0.37
COPS7B-221ENST00000488111 PPIBP23284 216 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms