RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	OPRPN	Q99935	248 aa	Predicted RBP	3.22	□□□□□ -1.89
VPS8-223	ENST00000485024	ATF6B	Q99941	703 aa		3.22	□□□□□ -1.89
VPS8-223	ENST00000485024	HSD17B14	Q9BPX1	270 aa		3.22	□□□□□ -1.89
VPS8-223	ENST00000485024	MCRIP2	Q9BUT9	160 aa	Known RBP	3.22	□□□□□ -1.89
VPS8-223	ENST00000485024	RAB33B	Q9H082	229 aa		3.22	□□□□□ -1.89
VPS8-223	ENST00000485024	ZNF696	Q9H7X3	374 aa		3.22	□□□□□ -1.89
VPS8-223	ENST00000485024	PALMD	Q9NP74	551 aa		3.22	□□□□□ -1.89
VPS8-223	ENST00000485024	C1orf123	Q9NWV4	160 aa		3.22	□□□□□ -1.89
VPS8-223	ENST00000485024	DUS2	Q9NX74	493 aa	Known RBP	3.22	□□□□□ -1.89
VPS8-223	ENST00000485024	CACNG5	Q9UF02	275 aa		3.22	□□□□□ -1.89
VPS8-223	ENST00000485024	B9D1	Q9UPM9	204 aa		3.22	□□□□□ -1.89
VPS8-223	ENST00000485024	KLHDC2	Q9Y2U9	406 aa		3.22	□□□□□ -1.89
VPS8-223	ENST00000485024	OR10H1	Q9Y4A9	318 aa		3.22	□□□□□ -1.89
VPS8-223	ENST00000485024	USP42	Q9H9J4	1324 aa	Known RBP	3.21	□□□□□ -1.89
VPS8-223	ENST00000485024	SPTA1	P02549	2419 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	CACNA1H	O95180	2353 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	NAV3	Q8IVL0	2385 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	TRGV8	A0A0C4DH27	118 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	TRBV5-4	A0A0C4DH59	114 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	TRBV7-9	A0A0J9YWB2	115 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	MBLAC1	A4D2B0	266 aa	Predicted RBP	3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	PCP4L1	A6NKN8	68 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	ARHGEF33	A8MVX0	844 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	FRAT2	O75474	233 aa	Predicted RBP	3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	SPAG6	O75602	509 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	ZFAND5	O76080	213 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	TOX	O94900	526 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	IGSF6	O95976	241 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	GOT2	P00505	430 aa	Known RBP	3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	OR9G9	P0C7N8	305 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	ZNF883	P0CG24	379 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	RPS2	P15880	293 aa	Known RBP	3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	RPA2	P15927	270 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	TSPAN8	P19075	237 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	ATP6V1C1	P21283	382 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	UGT1A4	P22310	534 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	GLRA2	P23416	452 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	HTR5A	P47898	357 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	GPM6B	Q13491	265 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	RFTN1	Q14699	578 aa	Predicted RBP	3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	ZNF146	Q15072	292 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	CDKN3	Q16667	212 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	CEP55	Q53EZ4	464 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	UNC50	Q53HI1	259 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	SCYL2	Q6P3W7	929 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	BLOC1S2	Q6QNY1	142 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	APOOL	Q6UXV4	268 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	TMEM184A	Q6ZMB5	413 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	LHFPL4	Q7Z7J7	247 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	VASH2	Q86V25	355 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	KCNMB4	Q86W47	210 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	KLHDC8B	Q8IXV7	354 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	OR52J3	Q8NH60	311 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	LRRC15	Q8TF66	581 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	MYLPF	Q96A32	169 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	SLC45A3	Q96JT2	553 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	CCT7	Q99832	543 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	FAM173A	Q9BQD7	235 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	ALG12	Q9BV10	488 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	NFKBIZ	Q9BYH8	718 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	OCR1	Q9BZK8	76 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	TMEM117	Q9H0C3	514 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	UBE2Z	Q9H832	354 aa	Predicted RBP	3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	LRRC40	Q9H9A6	602 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	IL1RAP	Q9NPH3	570 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	FAM114A2	Q9NRY5	505 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	ABCC13	Q9NSE7	274 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	AGPAT5	Q9NUQ2	364 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	DCAF13	Q9NV06	445 aa	Known RBP	3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	MBD2	Q9UBB5	411 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	MAB21L2	Q9Y586	359 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	SPACA6	W5XKT8	324 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	PLEKHH1	Q9ULM0	1364 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	ANKRD26	Q9UPS8	1709 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	CREBBP	Q92793	2442 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	WNK3	Q9BYP7	1800 aa		3.21	□□□□□ -1.9
VPS8-223	ENST00000485024	PIK3C2G	O75747	1445 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	IQGAP3	Q86VI3	1631 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	C11orf98	E9PRG8	122 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	PPIAL4D	F5H284	164 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024		G3V2L1	256 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	IDH3B	O43837	385 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	TPST2	O60704	377 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	CHRNA1	P02708	482 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	H2AFZ	P0C0S5	128 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	CLU	P10909	449 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	BCKDHA	P12694	445 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	DRD5	P21918	477 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	PTPN4	P29074	926 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	RFC2	P35250	354 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	SAA4	P35542	130 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	ARFIP1	P53367	373 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	METAP1	P53582	386 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	ACTR1A	P61163	376 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	CBX1	P83916	185 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	LRRC74A	Q0VAA2	488 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	CALCOCO2	Q13137	446 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	TMEM187	Q14656	261 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	PDK3	Q15120	406 aa		3.2	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms