RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 TP53INP1Q96A56 240 aa12.93□□□□□ -0.34
CLK3-204ENST00000483723 TMIGD2Q96BF3 282 aa12.93□□□□□ -0.34
CLK3-204ENST00000483723 SIGLEC11Q96RL6 698 aa12.93□□□□□ -0.34
CLK3-204ENST00000483723 WDR77Q9BQA1 342 aaPredicted RBP12.93□□□□□ -0.34
CLK3-204ENST00000483723 RASSF1Q9NS23 344 aa12.93□□□□□ -0.34
CLK3-204ENST00000483723 FLRT3Q9NZU0 649 aa12.93□□□□□ -0.34
CLK3-204ENST00000483723 EEF1B2P24534 225 aaKnown RBP12.92□□□□□ -0.34
CLK3-204ENST00000483723 PLA2G5P39877 138 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 GIPRP48546 466 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 IDH2P48735 452 aaKnown RBP12.92□□□□□ -0.34
CLK3-204ENST00000483723 RNF144AP50876 292 aaPredicted RBP12.92□□□□□ -0.34
CLK3-204ENST00000483723 SNRPGP62308 76 aaKnown RBP12.92□□□□□ -0.34
CLK3-204ENST00000483723 EFNB1P98172 346 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 SF3A2Q15428 464 aaKnown RBP12.92□□□□□ -0.34
CLK3-204ENST00000483723 ZBED5Q49AG3 693 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 HLA-DQA1Q5Y7H0 255 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 FAAH2Q6GMR7 532 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 XAF1Q6GPH4 301 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 ZNF440Q8IYI8 595 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 ZNF614Q8N883 585 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 APCDD1LQ8NCL9 501 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 B3GNT7Q8NFL0 401 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 WDR36Q8NI36 951 aaKnown RBP12.92□□□□□ -0.34
CLK3-204ENST00000483723 TRUB1Q8WWH5 349 aaKnown RBP12.92□□□□□ -0.34
CLK3-204ENST00000483723 IPCEF1Q8WWN9 437 aaPredicted RBP12.92□□□□□ -0.34
CLK3-204ENST00000483723 METTL21AQ8WXB1 218 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 EFHD2Q96C19 240 aaPredicted RBP12.92□□□□□ -0.34
CLK3-204ENST00000483723 HS6ST2Q96MM7 605 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 NODALQ96S42 347 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 TUBA1CQ9BQE3 449 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 ZNF426Q9BUY5 554 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 SLC25A19Q9HC21 320 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 FKBP14Q9NWM8 211 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 NXT1Q9UKK6 140 aaKnown RBP12.92□□□□□ -0.34
CLK3-204ENST00000483723 CEPT1Q9Y6K0 416 aa12.92□□□□□ -0.34
CLK3-204ENST00000483723 IGHV3-20A0A0C4DH32 117 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 A0A1B0GWA3 101 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 PTGES3LE9PB15 166 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 CHP2O43745 196 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 UTS2O95399 124 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 SOX14O95416 240 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 CSTAP01040 98 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 NGFRP08138 427 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 POU1F1P28069 291 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 SLC5A2P31639 672 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 KRT20P35900 424 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 NR0B1P51843 470 aaKnown RBP12.91□□□□□ -0.34
CLK3-204ENST00000483723 PNLIPRP2P54317 469 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 E2F1Q01094 437 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 PRKCDQ05655 676 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 TMEM201Q5SNT2 666 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 APOOLQ6UXV4 268 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 CPEB2Q7Z5Q1 589 aaKnown RBP12.91□□□□□ -0.34
CLK3-204ENST00000483723 NAXDQ8IW45 347 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 NRMQ8IXM6 262 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 SLC34A3Q8N130 599 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 CLDN22Q8N7P3 220 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 ZNF527Q8NB42 609 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 TMEM239Q8WW34 195 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 MPP4Q96JB8 637 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 POLR1BQ9H9Y6 1135 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 EXOSC3Q9NQT5 275 aaKnown RBP12.91□□□□□ -0.34
CLK3-204ENST00000483723 IMPAD1Q9NX62 359 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 SLC39A1Q9NY26 324 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 SH3D21A4FU49 640 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 H3BN98 237 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 KLK3P07288 261 aaPredicted RBP12.91□□□□□ -0.34
CLK3-204ENST00000483723 PCMT1P22061 227 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 TTKP33981 857 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 CTBP2P56545 445 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 RNF4P78317 190 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 PMS2P3Q13401 168 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 SLC25A30Q5SVS4 291 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 CDCP2Q5VXM1 449 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 P3H2Q8IVL5 708 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 OR8K3Q8NH51 312 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 NUBPLQ8TB37 319 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 FGF11Q92914 225 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 FAM46AQ96IP4 442 aaKnown RBP12.91□□□□□ -0.34
CLK3-204ENST00000483723 GAL3ST4Q96RP7 486 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 CMKLR1Q99788 373 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 NRSN2Q9GZP1 204 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 CCNB1IP1Q9NPC3 277 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 IL20Q9NYY1 176 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 ERVK-18Q9QC07 812 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 PSORS1C1Q9UIG5 152 aa12.91□□□□□ -0.34
CLK3-204ENST00000483723 LOC102723996A0A087X1L8 192 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 A0A1W2PQD3 144 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 H3BSA7 217 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 TMX2-CTNND1H3BSU7 103 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 PIP5K1CO60331 668 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 FAM20BO75063 409 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 REM1O75628 298 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 RBM34P42696 430 aaKnown RBP12.9□□□□□ -0.34
CLK3-204ENST00000483723 PIGFQ07326 219 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 GINS1Q14691 196 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 GTF2IRD2BQ6EKJ0 949 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 ACSM5Q6NUN0 579 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 ULK3Q6PHR2 472 aa12.9□□□□□ -0.34
CLK3-204ENST00000483723 PAPD4Q6PIY7 484 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms