RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 PDLIM1O00151 329 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 SDC3O75056 442 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 PLEKHA8P1O95397 391 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 DEXIO95424 95 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 IGHV3-9P01782 118 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 IGHG3P01860 377 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 ASNSP08243 561 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 ZCCHC18P0CG32 403 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 GOLGA8HP0CJ92 632 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 CCNA2P20248 432 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 PTPN6P29350 595 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 NOVP48745 357 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 FNTAP49354 379 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 METAP1P53582 386 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 LTB4RQ15722 352 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 ZIC1Q15915 447 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 PKN2Q16513 984 aaKnown RBP2.94□□□□□ -1.94
CBX3-207ENST00000481300 ZSWIM7Q19AV6 140 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 Q1RN00 199 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 LRIT3Q3SXY7 679 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 TIMM50Q3ZCQ8 353 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 CCDC92Q53HC0 331 aaPredicted RBP2.94□□□□□ -1.94
CBX3-207ENST00000481300 SPINK14Q6IE38 97 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 PAQR9Q6ZVX9 377 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 ARFGAP2Q8N6H7 521 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 CNNM3Q8NE01 707 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 FAM71CQ8NEG0 241 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 TYMSOSQ8TAI1 123 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 ACER1Q8TDN7 264 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 TADA1Q96BN2 335 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 C8orf76Q96K31 380 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 C9orf85Q96MD7 179 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 HSD3B7Q9H2F3 369 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 ROPN1Q9HAT0 212 aaPredicted RBP2.94□□□□□ -1.94
CBX3-207ENST00000481300 VAT1LQ9HCJ6 419 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 FAM114A2Q9NRY5 505 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 DCAF13Q9NV06 445 aaKnown RBP2.94□□□□□ -1.94
CBX3-207ENST00000481300 SOHLH2Q9NX45 425 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 KLRF1Q9NZS2 232 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 ABCD2Q9UBJ2 740 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 GHRLQ9UBU3 117 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 NTNG1Q9Y2I2 539 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 ATP6V1DQ9Y5K8 247 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 KLF2Q9Y5W3 355 aaPredicted RBP2.94□□□□□ -1.94
CBX3-207ENST00000481300 PLIN4Q96Q06 1357 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 COL4A5P29400 1685 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 TAF1LQ8IZX4 1826 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 TP53BP1Q12888 1972 aaPredicted RBP2.93□□□□□ -1.94
CBX3-207ENST00000481300 ANKRD36CQ5JPF3 1778 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 NID2Q14112 1375 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 TRBV7-9A0A0J9YWB2 115 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 TTC26A0AVF1 554 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 CCT8L1PA6NM43 557 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 F5H6K3 240 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 H3BTX0 84 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 LCMT2O60294 686 aaKnown RBP2.93□□□□□ -1.94
CBX3-207ENST00000481300 NDUFA7O95182 113 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 NDUFB10O96000 172 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 WNT2P09544 360 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 RRASP10301 218 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 PDHBP11177 359 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 TSPAN8P19075 237 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 PTPN4P29074 926 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 CHRNA3P32297 505 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 NF2P35240 595 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 MAGEA9P43362 315 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 ARHGDIBP52566 201 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 MRPS6P82932 125 aaKnown RBP2.93□□□□□ -1.94
CBX3-207ENST00000481300 ZNF33BQ06732 778 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 KLRC3Q07444 240 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 RAB35Q15286 201 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 ATAD3CQ5T2N8 411 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 MARC1Q5VT66 337 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 DMKNQ6E0U4 476 aaPredicted RBP2.93□□□□□ -1.94
CBX3-207ENST00000481300 BAIAP2L2Q6UXY1 529 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 PRSS48Q7RTY5 328 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 NAXDQ8IW45 347 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 GPD1LQ8N335 351 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 GMCL1P1Q8NEA9 526 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 TFB1MQ8WVM0 346 aaKnown RBP2.93□□□□□ -1.94
CBX3-207ENST00000481300 PINX1Q96BK5 328 aaKnown RBP2.93□□□□□ -1.94
CBX3-207ENST00000481300 DNAJA3Q96EY1 480 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 PIWIL1Q96J94 861 aaKnown RBP2.93□□□□□ -1.94
CBX3-207ENST00000481300 SPZ1Q9BXG8 430 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 ZSCAN16Q9H4T2 348 aaPredicted RBP2.93□□□□□ -1.94
CBX3-207ENST00000481300 RPAP3Q9H6T3 665 aaPredicted RBP2.93□□□□□ -1.94
CBX3-207ENST00000481300 NGBQ9NPG2 151 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 DUS2Q9NX74 493 aaKnown RBP2.93□□□□□ -1.94
CBX3-207ENST00000481300 P2RX2Q9UBL9 471 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 ZNF107Q9UII5 783 aaPredicted RBP2.93□□□□□ -1.94
CBX3-207ENST00000481300 NAALAD2Q9Y3Q0 740 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 RNF115Q9Y4L5 304 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 CLCA3PQ9Y6N3 262 aa2.93□□□□□ -1.94
CBX3-207ENST00000481300 AFDNP55196 1824 aaKnown RBP2.93□□□□□ -1.94
CBX3-207ENST00000481300 FAM230AA0A1W2PPH8 454 aa2.92□□□□□ -1.94
CBX3-207ENST00000481300 E9PMD0 336 aa2.92□□□□□ -1.94
CBX3-207ENST00000481300 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.92□□□□□ -1.94
CBX3-207ENST00000481300 SGK494L7N484 410 aa2.92□□□□□ -1.94
CBX3-207ENST00000481300 SAP18O00422 153 aaKnown RBP2.92□□□□□ -1.94
CBX3-207ENST00000481300 ALOX15BO15296 676 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms