RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 GAS1P54826 345 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 RPS27AP62979 156 aaKnown RBP12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 UBA52P62987 128 aaKnown RBP12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 MRPS21P82921 87 aaKnown RBP12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 ZNF155Q12901 538 aaPredicted RBP12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 SRSF5Q13243 272 aaKnown RBP12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 SNTB1Q13884 538 aaKnown RBP12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 SYTL3Q4VX76 610 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 TEX30Q5JUR7 227 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 SFRP5Q5T4F7 317 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 NOXRED1Q6NXP6 359 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 SLC30A8Q8IWU4 369 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 RNF113BQ8IZP6 322 aaKnown RBP12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 OR6V1Q8N148 313 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 GNPDA2Q8TDQ7 276 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 HMCESQ96FZ2 354 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 ZNF582Q96NG8 517 aaPredicted RBP12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 RBM14Q96PK6 669 aaKnown RBP12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 TEFMQ96QE5 360 aaKnown RBP12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 TSNAXQ99598 290 aaKnown RBP12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 SEMA3CQ99985 751 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 GAL3ST1Q99999 423 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 TMEM38AQ9H6F2 299 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 WDR26Q9H7D7 661 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 SARS2Q9NP81 518 aaKnown RBP12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 POLE3Q9NRF9 147 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 LSM7Q9UK45 103 aaKnown RBP12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 MRTO4Q9UKD2 239 aaKnown RBP12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 FAM186AA6NE01 2351 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 C2orf74A8MZ97 194 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 LRRN3E7EW58 273 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 J3KTA2 159 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 SCAMP1O15126 338 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 PRODHO43272 600 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 KAT7O95251 611 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 APBB3O95704 486 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 APODP05090 189 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 SPP1P10451 314 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 IFNGR1P15260 489 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 RHOQP17081 205 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 FEN1P39748 380 aaKnown RBP12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 CCR6P51684 374 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 SCARB2Q14108 478 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 SEC23BQ15437 767 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 NDUFA9Q16795 377 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 ELFN2Q5R3F8 820 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 C10orf120Q5SQS8 335 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 KIAA1161Q6NSJ0 714 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 Q6ZNB5 142 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 GLT6D1Q7Z4J2 308 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 TMEM25Q86YD3 366 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 CLECL1Q8IZS7 167 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 SAMD12Q8N8I0 201 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 ZNF485Q8NCK3 441 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 BPIFCQ8NFQ6 507 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 OR4K2Q8NGD2 314 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 OR6K3Q8NGY3 331 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 MAL2Q969L2 176 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 RAD51AP1Q96B01 352 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 RGMAQ96B86 450 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 FAIM2Q9BWQ8 316 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 ARL6Q9H0F7 186 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 PIGMQ9H3S5 423 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 LRRN3Q9H3W5 708 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 RDH14Q9HBH5 336 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 GPN1Q9HCN4 374 aaPredicted RBP12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 NIT2Q9NQR4 276 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 EXOSC3Q9NQT5 275 aaKnown RBP12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 ACSL6Q9UKU0 697 aa12.28□□□□□ -0.44
CNKSR3-204ENST00000479339 SHISA3A0PJX4 238 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 LCMT2O60294 686 aaKnown RBP12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 LRP3O75074 770 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 RGS9O75916 674 aaPredicted RBP12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 GUCA1CO95843 209 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 HEXAP06865 529 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 ACADLP28330 430 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 DCDP81605 110 aaKnown RBP12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 SNTB2Q13425 540 aaKnown RBP12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 KRT33BQ14525 404 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 RNF212Q495C1 297 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 MINDY4Q4G0A6 757 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 ZNF660Q6AZW8 331 aaPredicted RBP12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 USP53Q70EK8 1073 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 CAMKMTQ7Z624 323 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 NAGSQ8N159 534 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 FAM98AQ8NCA5 519 aaKnown RBP12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 ASB13Q8WXK3 278 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 APOLD1Q96LR9 279 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 ABHD1Q96SE0 405 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 DUSP26Q9BV47 211 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 TMED9Q9BVK6 235 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 PAPOLGQ9BWT3 736 aaKnown RBP12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 CHIAQ9BZP6 476 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 POLR2J3Q9H1A7 115 aaKnown RBP12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 TEX10Q9NXF1 929 aaPredicted RBP12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 PPP1R14DQ9NXH3 145 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 TAS2R3Q9NYW6 316 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 NLGN3Q9NZ94 848 aa12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 AKAP7Q9P0M2 348 aaPredicted RBP12.27□□□□□ -0.44
CNKSR3-204ENST00000479339 TSR3Q9UJK0 312 aaKnown RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms