RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 GPR52Q9Y2T5 361 aa12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 GPC6Q9Y625 555 aaPredicted RBP12.95□□□□□ -0.34
SMARCE1-209ENST00000478349 KIAA1549Q9HCM3 1950 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 FREM3P0C091 2139 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 SHISA8B8ZZ34 492 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 GTPBP1O00178 669 aaKnown RBP12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 TNFSF11O14788 317 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 PEX11AO75192 247 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 AK1P00568 194 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 CHRNGP07510 517 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 ALDH3A1P30838 453 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 CCT3P49368 545 aaKnown RBP12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 CARD18P57730 90 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 XKR7Q5GH72 579 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 DCST2Q5T1A1 773 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 CLEC9AQ6UXN8 241 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 PLEKHM3Q6ZWE6 761 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 ZNF550Q7Z398 422 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 LILRA2Q8N149 483 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 STEAP2Q8NFT2 490 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 ADGRG7Q96K78 797 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 ZIM3Q96PE6 472 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 HDHD5Q9BXW7 423 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 ROPN1BQ9BZX4 212 aaPredicted RBP12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 CXorf56Q9H5V9 222 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 TMEM185BQ9H7F4 350 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 ROPN1Q9HAT0 212 aaPredicted RBP12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 LGALS13Q9UHV8 139 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 ACTL7BQ9Y614 415 aa12.94□□□□□ -0.34
SMARCE1-209ENST00000478349 A0A1W2PPR1 153 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 DUXAA6NLW8 204 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 TMEM233B4DJY2 109 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 CFLARO15519 480 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 SNUPNO95149 360 aaKnown RBP12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 SLC7A1P30825 629 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 P2RX1P51575 399 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 CTU2Q2VPK5 515 aaKnown RBP12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 CCNJQ5T5M9 372 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 SLC43A2Q8N370 569 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 TMCO5AQ8N6Q1 288 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 TOR1AIP2Q8NFQ8 470 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 OR7A2PQ8NGA2 310 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 PSMA8Q8TAA3 256 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 AGR3Q8TD06 166 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 TMEM171Q8WVE6 324 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 OSTF1Q92882 214 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 CDS1Q92903 461 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 TUBGCP3Q96CW5 907 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 C16orf58Q96GQ5 468 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 BHLHE41Q9C0J9 482 aaPredicted RBP12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 ACTR6Q9GZN1 396 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 L2HGDHQ9H9P8 463 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 SIRT3Q9NTG7 399 aaPredicted RBP12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 CLEC4AQ9UMR7 237 aa12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 FLNAP21333 2647 aaKnown RBP12.93□□□□□ -0.34
SMARCE1-209ENST00000478349 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 SKAP2O75563 359 aaPredicted RBP12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 SLU7O95391 586 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 AGR2O95994 175 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 HEXAP06865 529 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 LINGO3P0C6S8 592 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 LAMP1P11279 417 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 PSMB1P20618 241 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 PSMA4P25789 261 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 AGTR1P30556 359 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 SFTPDP35247 375 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 SOAT1P35610 550 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 SLC6A8P48029 635 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 ATP12AP54707 1039 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 ZNF117Q03924 483 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 LTBQ06643 244 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 FOXF1Q12946 379 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 SELENBP1Q13228 472 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 CD226Q15762 336 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 ZNF239Q16600 458 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 SMU1Q2TAY7 513 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 UGT3A2Q3SY77 523 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 EXOSC6Q5RKV6 272 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 C6orf136Q5SQH8 315 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 STAC2Q6ZMT1 411 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 SSX8Q7RTT4 187 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 YTHDF3Q7Z739 585 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 ZNF614Q8N883 585 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 TCP10LQ8TDR4 215 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 RNF128Q8TEB7 428 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 MED12Q93074 2177 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 OTUB1Q96FW1 271 aaPredicted RBP12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 MRGPRX4Q96LA9 322 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 C1orf50Q9BV19 199 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 GSX2Q9BZM3 304 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 GSX1Q9H4S2 264 aaPredicted RBP12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 NOP53Q9NZM5 478 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 KLHL13Q9P2N7 655 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 PCDHGB4Q9UN71 923 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 DTNAQ9Y4J8 743 aa12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 HRNRQ86YZ3 2850 aaPredicted RBP12.92□□□□□ -0.34
SMARCE1-209ENST00000478349 ABCA2Q9BZC7 2435 aa12.91□□□□□ -0.34
SMARCE1-209ENST00000478349 A0A0J9YW62 118 aa12.91□□□□□ -0.34
SMARCE1-209ENST00000478349 SIAH2O43255 324 aa12.91□□□□□ -0.34
SMARCE1-209ENST00000478349 EIF4E2O60573 245 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms