RNA–Protein interactions for RNA: ENST00000478082.5

PLOD3-212, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 1,585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-212ENST00000478082 CPPED1Q9BRF8 314 aaPredicted RBP16.89■□□□□ 0.3
PLOD3-212ENST00000478082 P2RX2Q9UBL9 471 aa16.89■□□□□ 0.3
PLOD3-212ENST00000478082 SUCOQ9UBS9 1254 aaKnown RBP16.89■□□□□ 0.3
PLOD3-212ENST00000478082 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.89■□□□□ 0.3
PLOD3-212ENST00000478082 LIPT1Q9Y234 373 aa16.89■□□□□ 0.3
PLOD3-212ENST00000478082 NCOA6Q14686 2063 aaPredicted RBP16.89■□□□□ 0.29
PLOD3-212ENST00000478082 FIGNL2A6NMB9 653 aa16.89■□□□□ 0.29
PLOD3-212ENST00000478082 GTPBP1O00178 669 aaKnown RBP16.89■□□□□ 0.29
PLOD3-212ENST00000478082 ACTL6AO96019 429 aa16.89■□□□□ 0.29
PLOD3-212ENST00000478082 GUSBP08236 651 aa16.89■□□□□ 0.29
PLOD3-212ENST00000478082 UBL4AP11441 157 aa16.89■□□□□ 0.29
PLOD3-212ENST00000478082 PER3P56645 1201 aa16.89■□□□□ 0.29
PLOD3-212ENST00000478082 CLDN15P56746 228 aa16.89■□□□□ 0.29
PLOD3-212ENST00000478082 CLDN18P56856 261 aa16.89■□□□□ 0.29
PLOD3-212ENST00000478082 SKP2Q13309 424 aa16.89■□□□□ 0.29
PLOD3-212ENST00000478082 FGFBP1Q14512 234 aa16.89■□□□□ 0.29
PLOD3-212ENST00000478082 ZNF630Q2M218 657 aaPredicted RBP16.89■□□□□ 0.29
PLOD3-212ENST00000478082 TMEM44Q2T9K0 475 aa16.89■□□□□ 0.29
PLOD3-212ENST00000478082 RUNDC3AQ59EK9 446 aa16.89■□□□□ 0.29
PLOD3-212ENST00000478082 C1orf185Q5T7R7 199 aa16.89■□□□□ 0.29
PLOD3-212ENST00000478082 AP1ARQ63HQ0 302 aa16.89■□□□□ 0.29
PLOD3-212ENST00000478082 MRGPRGQ86SM5 289 aa16.89■□□□□ 0.29
PLOD3-212ENST00000478082 DPP10Q8N608 796 aa16.89■□□□□ 0.29
PLOD3-212ENST00000478082 SLC39A3Q9BRY0 314 aa16.89■□□□□ 0.29
PLOD3-212ENST00000478082 TTYH2Q9BSA4 534 aa16.89■□□□□ 0.29
PLOD3-212ENST00000478082 POLE3Q9NRF9 147 aa16.89■□□□□ 0.29
PLOD3-212ENST00000478082 UTP20O75691 2785 aaKnown RBP16.89■□□□□ 0.29
PLOD3-212ENST00000478082 NBPF19A0A087WUL8 3843 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 PCNX1Q96RV3 2341 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 LOC100653049A0A140TA62 436 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 GMNCA6NCL1 334 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 H3BML4 177 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 ADAM11O75078 769 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 WDR1O75083 606 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 CYP7B1O75881 506 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 KRT34O76011 436 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 OPN1LWP04000 364 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 LINGO3P0C6S8 592 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 UBTFL6P0CB48 400 aaPredicted RBP16.88■□□□□ 0.29
PLOD3-212ENST00000478082 GLI4P10075 376 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 IL11P20809 199 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 MSX1P28360 303 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 PGM1P36871 562 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 ADH7P40394 386 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 ANXA11P50995 505 aaKnown RBP16.88■□□□□ 0.29
PLOD3-212ENST00000478082 P2RX1P51575 399 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 SUCLG1P53597 346 aaKnown RBP16.88■□□□□ 0.29
PLOD3-212ENST00000478082 MTPNP58546 118 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 TXNL4AP83876 142 aaKnown RBP16.88■□□□□ 0.29
PLOD3-212ENST00000478082 NFYCQ13952 458 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 ACSF3Q4G176 576 aaPredicted RBP16.88■□□□□ 0.29
PLOD3-212ENST00000478082 B3GNT6Q6ZMB0 384 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 SNX32Q86XE0 403 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 UBQLNLQ8IYU4 475 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 TMCO5AQ8N6Q1 288 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 RNF145Q96MT1 663 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 TUBA1CQ9BQE3 449 aa16.88■□□□□ 0.29
PLOD3-212ENST00000478082 AGAP5A6NIR3 686 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 H3BNH8 94 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 ZNF264O43296 627 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 TOXO94900 526 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 CSTAP01040 98 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 BMP2P12643 396 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 ZNF708P17019 499 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 RPS4Y1P22090 263 aaKnown RBP16.87■□□□□ 0.29
PLOD3-212ENST00000478082 CHMP24386 653 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 CCR4P51679 360 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 CLDN20P56880 219 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 FOXF1Q12946 379 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 REP15Q6BDI9 236 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 AAGABQ6PD74 315 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 VRK2Q86Y07 508 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 CCDC71Q8IV32 467 aaPredicted RBP16.87■□□□□ 0.29
PLOD3-212ENST00000478082 POU5F2Q8N7G0 328 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 GPR119Q8TDV5 335 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 TSPEARQ8WU66 669 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 PHF10Q8WUB8 498 aaKnown RBP16.87■□□□□ 0.29
PLOD3-212ENST00000478082 SMPDL3BQ92485 455 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 CGREF1Q99674 301 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 TREX2Q9BQ50 279 aaPredicted RBP16.87■□□□□ 0.29
PLOD3-212ENST00000478082 RSPO3Q9BXY4 272 aaPredicted RBP16.87■□□□□ 0.29
PLOD3-212ENST00000478082 FAM53CQ9NYF3 392 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 DOPEY1Q5JWR5 2465 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 ICE1Q9Y2F5 2266 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 HEATR5AQ86XA9 2040 aa16.87■□□□□ 0.29
PLOD3-212ENST00000478082 DSPPQ9NZW4 1301 aa16.86■□□□□ 0.29
PLOD3-212ENST00000478082 SNX3O60493 162 aa16.86■□□□□ 0.29
PLOD3-212ENST00000478082 NUDT14O95848 222 aa16.86■□□□□ 0.29
PLOD3-212ENST00000478082 CPN1P15169 458 aa16.86■□□□□ 0.29
PLOD3-212ENST00000478082 PSMA4P25789 261 aaKnown RBP16.86■□□□□ 0.29
PLOD3-212ENST00000478082 ZNF41P51814 821 aaPredicted RBP16.86■□□□□ 0.29
PLOD3-212ENST00000478082 KCNJ10P78508 379 aa16.86■□□□□ 0.29
PLOD3-212ENST00000478082 FADDQ13158 208 aa16.86■□□□□ 0.29
PLOD3-212ENST00000478082 MTDHQ86UE4 582 aaKnown RBP16.86■□□□□ 0.29
PLOD3-212ENST00000478082 TREML1Q86YW5 311 aa16.86■□□□□ 0.29
PLOD3-212ENST00000478082 FAM71CQ8NEG0 241 aa16.86■□□□□ 0.29
PLOD3-212ENST00000478082 NFKBIDQ8NI38 313 aa16.86■□□□□ 0.29
PLOD3-212ENST00000478082 CNOT9Q92600 299 aaKnown RBP16.86■□□□□ 0.29
PLOD3-212ENST00000478082 ANKRD27Q96NW4 1050 aa16.86■□□□□ 0.29
PLOD3-212ENST00000478082 TRIB1Q96RU8 372 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms