RNA–Protein interactions for RNA: ENST00000477345.1

TPRN-203, Transcript of taperin, humanhuman

TSL 1 (best)

Gene TPRN, Length 3,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-203ENST00000477345 NPAS4Q8IUM7 802 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 MS4A3Q96HJ5 214 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 SLC6A18Q96N87 628 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 TOX2Q96NM4 488 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 TSNAXQ99598 290 aaKnown RBP12.12□□□□□ -0.47
TPRN-203ENST00000477345 GINS4Q9BRT9 223 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.12□□□□□ -0.47
TPRN-203ENST00000477345 DLL4Q9NR61 685 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 ZDHHC3Q9NYG2 299 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 SH2B3Q9UQQ2 575 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 SHISA3A0PJX4 238 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 J3QLW9 94 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 ADH1CP00326 375 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 ZNF19P17023 458 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 GABRB1P18505 474 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 GIPRP48546 466 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 CTSCP53634 463 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 ZNF763Q0D2J5 394 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 CCDC157Q569K6 752 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 C19orf48Q6RUI8 117 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 GDPGP1Q6ZNW5 385 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 LINGO2Q7L985 606 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 CYB561A3Q8NBI2 242 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 CAMKVQ8NCB2 501 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 PROKR2Q8NFJ6 384 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 PEX11GQ96HA9 241 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 MSLNLQ96KJ4 702 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 F2RL3Q96RI0 385 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 BBS4Q96RK4 519 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 RIOK2Q9BVS4 552 aaKnown RBP12.12□□□□□ -0.47
TPRN-203ENST00000477345 CXorf36Q9H7Y0 433 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 THSD1Q9NS62 852 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 ZCCHC3Q9NUD5 404 aaKnown RBP12.12□□□□□ -0.47
TPRN-203ENST00000477345 NDUFB11Q9NX14 153 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 LHX3Q9UBR4 397 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 CORO2BQ9UQ03 480 aa12.12□□□□□ -0.47
TPRN-203ENST00000477345 GABRPO00591 440 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 PGRMC2O15173 223 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 IGSF6O95976 241 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 RLN1P04808 185 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 GNSP15586 552 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 FUT1P19526 365 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 PPIBP23284 216 aaKnown RBP12.11□□□□□ -0.47
TPRN-203ENST00000477345 ELAVL4P26378 380 aaKnown RBP12.11□□□□□ -0.47
TPRN-203ENST00000477345 B4GALNT1Q00973 533 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 ODF4Q2M2E3 257 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 ACER2Q5QJU3 275 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 CBLN2Q8IUK8 224 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 OXR1Q8N573 874 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 RNASE11Q8TAA1 199 aaKnown RBP12.11□□□□□ -0.47
TPRN-203ENST00000477345 SPSB2Q99619 263 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 VRK1Q99986 396 aaPredicted RBP12.11□□□□□ -0.47
TPRN-203ENST00000477345 C19orf43Q9BQ61 176 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 FUZQ9BT04 418 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 CFAP97Q9P2B7 532 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 ZNF69Q9UC07 566 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 ZNF840PA6NDX5 716 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 GAPDHSO14556 408 aaPredicted RBP12.11□□□□□ -0.47
TPRN-203ENST00000477345 ARPC5O15511 151 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 VEGFDO43915 354 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 CRYBA1P05813 215 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 ATP1B2P14415 290 aaPredicted RBP12.11□□□□□ -0.47
TPRN-203ENST00000477345 ZNF8P17098 575 aaPredicted RBP12.11□□□□□ -0.47
TPRN-203ENST00000477345 MMP11P24347 488 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 DDX6P26196 483 aaKnown RBP eCLIP12.11□□□□□ -0.47
TPRN-203ENST00000477345 TRHRP34981 398 aaPredicted RBP12.11□□□□□ -0.47
TPRN-203ENST00000477345 XCR1P46094 333 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 VEGFBP49765 207 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 GPR143P51810 404 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 MVDP53602 400 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 MLLT11Q13015 90 aaPredicted RBP12.11□□□□□ -0.47
TPRN-203ENST00000477345 ATXN7L3Q14CW9 347 aaPredicted RBP12.11□□□□□ -0.47
TPRN-203ENST00000477345 TMEM44Q2T9K0 475 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 RNF212Q495C1 297 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 TCTN3Q6NUS6 607 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 TMEM220Q6QAJ8 160 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 DNAJB7Q7Z6W7 309 aaPredicted RBP12.11□□□□□ -0.47
TPRN-203ENST00000477345 CCDC116Q8IYX3 515 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 CHST14Q8NCH0 376 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 SCARB1Q8WTV0 552 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 DNAJA3Q96EY1 480 aa12.11□□□□□ -0.47
TPRN-203ENST00000477345 FUBP3Q96I24 572 aaKnown RBP eCLIP12.11□□□□□ -0.47
TPRN-203ENST00000477345 DDX31Q9H8H2 851 aaKnown RBP12.11□□□□□ -0.47
TPRN-203ENST00000477345 GPR171O14626 319 aa12.1□□□□□ -0.47
TPRN-203ENST00000477345 EGFP01133 1207 aa12.1□□□□□ -0.47
TPRN-203ENST00000477345 IL1AP01583 271 aa12.1□□□□□ -0.47
TPRN-203ENST00000477345 SNRPBP14678 240 aaKnown RBP12.1□□□□□ -0.47
TPRN-203ENST00000477345 NDUFB7P17568 137 aa12.1□□□□□ -0.47
TPRN-203ENST00000477345 NR0B1P51843 470 aaKnown RBP12.1□□□□□ -0.47
TPRN-203ENST00000477345 CLDN12P56749 244 aa12.1□□□□□ -0.47
TPRN-203ENST00000477345 ZNF750Q32MQ0 723 aa12.1□□□□□ -0.47
TPRN-203ENST00000477345 DPPA2Q7Z7J5 298 aa12.1□□□□□ -0.47
TPRN-203ENST00000477345 SLC9B2Q86UD5 537 aa12.1□□□□□ -0.47
TPRN-203ENST00000477345 MEIOBQ8N635 442 aa12.1□□□□□ -0.47
TPRN-203ENST00000477345 OR52N2Q8NGI0 321 aa12.1□□□□□ -0.47
TPRN-203ENST00000477345 PAWRQ96IZ0 340 aaKnown RBP12.1□□□□□ -0.47
TPRN-203ENST00000477345 ZNF582Q96NG8 517 aaPredicted RBP12.1□□□□□ -0.47
TPRN-203ENST00000477345 OR2M2Q96R28 347 aa12.1□□□□□ -0.47
TPRN-203ENST00000477345 ORAI3Q9BRQ5 295 aa12.1□□□□□ -0.47
TPRN-203ENST00000477345 ISG20L2Q9H9L3 353 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms