RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 CASP8Q14790 479 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 MEF2DQ14814 521 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 OPCMLQ14982 345 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 OR1C1Q15619 314 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 VPS26BQ4G0F5 336 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 SLC9C1Q4G0N8 1177 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 XKR4Q5GH76 650 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 C6orf183Q5T699 404 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 C1QL3Q5VWW1 255 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 LYPLAL1Q5VWZ2 237 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 LIPNQ5VXI9 398 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 ZNF776Q68DI1 518 aaPredicted RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 STUMQ69YW2 141 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 SLC27A4Q6P1M0 643 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 SASS6Q6UVJ0 657 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 DEF8Q6ZN54 512 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 ASRGL1Q7L266 308 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 TRMT1LQ7Z2T5 733 aaKnown RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 MRPL21Q7Z2W9 205 aaKnown RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 MOB3BQ86TA1 216 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 RANBP3LQ86VV4 465 aaPredicted RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 SLC26A11Q86WA9 606 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 SERPINA9Q86WD7 417 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 C17orf64Q86WR6 236 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 PALB2Q86YC2 1186 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 MARCH9Q86YJ5 346 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 CHERPQ8IWX8 916 aaKnown RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 NELFCDQ8IXH7 590 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 LRRC34Q8IZ02 419 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 MUC20Q8N307 709 aaPredicted RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 ARHGAP18Q8N392 663 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 CPSF7Q8N684 471 aaKnown RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 SNX31Q8N9S9 440 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 NECAP1Q8NC96 275 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 CHDHQ8NE62 594 aaPredicted RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 FBXO36Q8NEA4 188 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 NFAM1Q8NET5 270 aaPredicted RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 OR8J2Q8NGG1 315 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 CAPSLQ8WWF8 208 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 HTR3CQ8WXA8 447 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 ING5Q8WYH8 240 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 IRGQQ8WZA9 623 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 NRGNQ92686 78 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 GTF2H4Q92759 462 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 DAZLQ92904 295 aaKnown RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 FAM131CQ96AQ9 280 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 MTBPQ96DY7 904 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 ZNF514Q96K75 400 aaPredicted RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 GFM1Q96RP9 751 aaKnown RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 MAP3K3Q99759 626 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 CTRCQ99895 268 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 AGPAT1Q99943 283 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 SELENOSQ9BQE4 189 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 CCM2Q9BSQ5 444 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 MED10Q9BTT4 135 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 C9orf16Q9BUW7 83 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 HINT2Q9BX68 163 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 SEMA4CQ9C0C4 833 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 OR2B2Q9GZK3 357 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 LRMDAQ9H2I8 198 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 DPEP2Q9H4A9 486 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 C5orf66Q9H5L9 145 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 CLK4Q9HAZ1 481 aaKnown RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 IL1RL2Q9HB29 575 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 RAB18Q9NP72 206 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 ACKR4Q9NPB9 350 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 AKIP1Q9NQ31 210 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 MBNL3Q9NUK0 354 aaKnown RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 C1orf123Q9NWV4 160 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 SYBUQ9NX95 663 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 ASIC5Q9NY37 505 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 EURLQ9NYK6 297 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 KLRF1Q9NZS2 232 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 CLN8Q9UBY8 286 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 PHF11Q9UIL8 331 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 DIMT1Q9UNQ2 313 aaKnown RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 MAP3K2Q9Y2U5 619 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 NSG2Q9Y328 171 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 RBMX2Q9Y388 322 aaKnown RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 ETV7Q9Y603 341 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 SPIN1Q9Y657 262 aaPredicted RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 HS3ST3A1Q9Y663 406 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 FKBP7Q9Y680 259 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 COLEC10Q9Y6Z7 277 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 KNDC1Q76NI1 1749 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 CRYBG1Q9Y4K1 1723 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 CCDC88AQ3V6T2 1871 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 AKAP13Q12802 2813 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 ABCC6O95255 1503 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 A0A1W2PPE3 182 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 TCRBV5S1A1TA0A578 114 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 LRRC30A6NM36 301 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 C1QTNF3-AMACRE9PGA6 284 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 DLGAP1O14490 977 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 RAB29O14966 203 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 RAD51BO15315 384 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 LDB2O43679 373 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 UGDHO60701 494 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 SEMA7AO75326 666 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 RBBP9O75884 186 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms