RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 K7EQG2 157 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 HAS3O00219 553 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 FBP2O00757 339 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 RASGRF2O14827 1237 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 BCL2L11O43521 198 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 TSPAN2O60636 221 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 REC8O95072 547 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 NDUFB10O96000 172 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 MT-ATP6P00846 226 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 CALCAP01258 141 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 FCER2P06734 321 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 ADORA3P0DMS8 318 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 ETS1P14921 441 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 CCNA2P20248 432 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 IL4RP24394 825 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 U2AF2P26368 475 aaKnown RBP eCLIP3.54□□□□□ -1.84
CNOT4-209ENST00000473470 MAGEA9P43362 315 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 UQCRFS1P47985 274 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 SLC1A6P48664 564 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 NDST1P52848 882 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 RPS27AP62979 156 aaKnown RBP3.54□□□□□ -1.84
CNOT4-209ENST00000473470 GSTO1P78417 241 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 SRPXP78539 464 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 SP4Q02446 784 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 KLF5Q13887 457 aaPredicted RBP3.54□□□□□ -1.84
CNOT4-209ENST00000473470 FASTKQ14296 549 aaKnown RBP3.54□□□□□ -1.84
CNOT4-209ENST00000473470 SLC17A1Q14916 467 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 ZNF146Q15072 292 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 PON2Q15165 354 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 HAGHQ16775 308 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 SLC25A30Q5SVS4 291 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 DCAF12Q5T6F0 453 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 LIPJQ5W064 366 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 OR6B2Q6IFH4 312 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 RHBDD2Q6NTF9 364 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 FAM159AQ6UWV7 190 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 Q6ZR54 194 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 RBM43Q6ZSC3 357 aaKnown RBP3.54□□□□□ -1.84
CNOT4-209ENST00000473470 SLC25A42Q86VD7 318 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 KCNMB4Q86W47 210 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 CATSPER3Q86XQ3 398 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.54□□□□□ -1.84
CNOT4-209ENST00000473470 RDH11Q8TC12 318 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 SETD7Q8WTS6 366 aaKnown RBP3.54□□□□□ -1.84
CNOT4-209ENST00000473470 PDCD6IPQ8WUM4 868 aaKnown RBP3.54□□□□□ -1.84
CNOT4-209ENST00000473470 PNPLA2Q96AD5 504 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 COQ7Q99807 217 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 OCR1Q9BZK8 76 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 ZBP1Q9H171 429 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 HEXA-AS1Q9H8Q6 139 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 WDR41Q9HAD4 459 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 PRR34Q9NV39 138 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 NDUFA13Q9P0J0 144 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 ERVK-18Q9QC07 812 aa3.54□□□□□ -1.84
CNOT4-209ENST00000473470 PDCD11Q14690 1871 aaKnown RBP3.54□□□□□ -1.84
CNOT4-209ENST00000473470 MTCL1Q9Y4B5 1905 aaKnown RBP3.53□□□□□ -1.84
CNOT4-209ENST00000473470 IGKV6D-41A0A0C4DH26 115 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 VPS37CA5D8V6 355 aaPredicted RBP3.53□□□□□ -1.84
CNOT4-209ENST00000473470 CCL16O15467 120 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 STAM2O75886 525 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 OR6B1O95007 311 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 TGFAP01135 160 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 IGHG1P01857 330 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 HOXB7P09629 217 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 MBL2P11226 248 aaPredicted RBP3.53□□□□□ -1.84
CNOT4-209ENST00000473470 HLA-EP13747 358 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 AKT2P31751 481 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 ACADSBP45954 432 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 MTIF2P46199 727 aaKnown RBP3.53□□□□□ -1.84
CNOT4-209ENST00000473470 ASMTP46597 345 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 SLC6A8P48029 635 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 TKTL1P51854 596 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 NLRP11P59045 1033 aaKnown RBP3.53□□□□□ -1.84
CNOT4-209ENST00000473470 MGAT3Q09327 533 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 TRADDQ15628 312 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 ECSCRQ19T08 205 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 TTC31Q49AM3 519 aaPredicted RBP3.53□□□□□ -1.84
CNOT4-209ENST00000473470 BEND3Q5T5X7 828 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 DDI2Q5TDH0 399 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 CLEC18BQ6UXF7 455 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 BNIPLQ7Z465 357 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 YRDCQ86U90 279 aaKnown RBP3.53□□□□□ -1.84
CNOT4-209ENST00000473470 LINC00612Q8N6U2 182 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 ICA1LQ8NDH6 482 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 CHDHQ8NE62 594 aaPredicted RBP3.53□□□□□ -1.84
CNOT4-209ENST00000473470 SDR42E1Q8WUS8 393 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 PCNPQ8WW12 178 aaKnown RBP3.53□□□□□ -1.84
CNOT4-209ENST00000473470 FGF13Q92913 245 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 NABP1Q96AH0 204 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 TMEM45BQ96B21 275 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 CASD1Q96PB1 797 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 KRT23Q9C075 422 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 MOB1AQ9H8S9 216 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 SLC38A10Q9HBR0 1119 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 HPS4Q9NQG7 708 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 DEPPQ9NTK1 212 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 THYN1Q9P016 225 aa3.53□□□□□ -1.84
CNOT4-209ENST00000473470 CSMD2Q7Z408 3487 aa3.52□□□□□ -1.85
CNOT4-209ENST00000473470 ZMYM6O95789 1325 aa3.52□□□□□ -1.85
CNOT4-209ENST00000473470 ATRQ13535 2644 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms