RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 ITGADQ13349 1161 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 SLC29A2Q14542 456 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 RASA2Q15283 850 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 STK11Q15831 433 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 DUSP5Q16690 384 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 GLE1Q53GS7 698 aaKnown RBP11.15□□□□□ -0.62
TRAF4-209ENST00000473421 TMEM201Q5SNT2 666 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 TRABD2AQ86V40 505 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 ZNF75CPQ92670 426 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-209ENST00000473421 KISS1RQ969F8 398 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-209ENST00000473421 ZBTB8AQ96BR9 441 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 ZNF300Q96RE9 604 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-209ENST00000473421 PAFAH2Q99487 392 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 LRTM1Q9HBL6 345 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 SIRT5Q9NXA8 310 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 A0A087WZY1 265 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 A0A1W2PNR3 127 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 A0A1W2PR80 420 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 ELOA3DA6NLF2 546 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-209ENST00000473421 WIPF1O43516 503 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 YES1P07947 543 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 ZNF41P51814 821 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-209ENST00000473421 PRKAG1P54619 331 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 CASP9P55211 416 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 FOXG1P55316 489 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-209ENST00000473421 ZNF117Q03924 483 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 TSNAXIP1Q2TAA8 658 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 ELOA3BQ3SY89 546 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 TMEM176BQ3YBM2 270 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-209ENST00000473421 SPDYAQ5MJ70 313 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 FCRLAQ7L513 359 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 ELOA3Q8NG57 546 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 FBXO27Q8NI29 283 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 ACTRT2Q8TDY3 377 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 FUT8Q9BYC5 575 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 POTEKPQ9BYX7 375 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 GRIP2Q9C0E4 1043 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 ALG2Q9H553 416 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 MYNNQ9NPC7 610 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 PAQR5Q9NXK6 330 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-209ENST00000473421 PTGDR2Q9Y5Y4 395 aa11.14□□□□□ -0.63
TRAF4-209ENST00000473421 POC1B-GALNT4F8VUJ3 575 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 HAX1O00165 279 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 ZNF195O14628 629 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 PRKD3O94806 890 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 KCNH1O95259 989 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 IGHV3-9P01782 118 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 NGFRP08138 427 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 PRPS2P11908 318 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 GCAP28676 217 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 TTKP33981 857 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 NTF4P34130 210 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 OR3A2P47893 321 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 PPA1Q15181 289 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 ZNHIT3Q15649 155 aaPredicted RBP11.13□□□□□ -0.63
TRAF4-209ENST00000473421 EXOSC6Q5RKV6 272 aaKnown RBP11.13□□□□□ -0.63
TRAF4-209ENST00000473421 Q6ZSR9 355 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 OR2W6PQ8NHA6 318 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 B4GALNT2Q8NHY0 566 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 C10orf105Q8TEF2 133 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 C1orf159Q96HA4 380 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 PSD2Q9BQI7 771 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 CDC42EP4Q9H3Q1 356 aaKnown RBP11.13□□□□□ -0.63
TRAF4-209ENST00000473421 GSTO2Q9H4Y5 243 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 ANKZF1Q9H8Y5 726 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 BARX1Q9HBU1 254 aaPredicted RBP11.13□□□□□ -0.63
TRAF4-209ENST00000473421 MIEF1Q9NQG6 463 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 GIN1Q9NXP7 522 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 MRTO4Q9UKD2 239 aaKnown RBP11.13□□□□□ -0.63
TRAF4-209ENST00000473421 GRID1Q9ULK0 1009 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 CCL27Q9Y4X3 112 aa11.13□□□□□ -0.63
TRAF4-209ENST00000473421 NPIPB8E9PQR5 432 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 SMAD9O15198 467 aaKnown RBP11.12□□□□□ -0.63
TRAF4-209ENST00000473421 INHBAP08476 426 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 IMPDH1P20839 514 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 NTSP30990 170 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 PSMD4P55036 377 aaKnown RBP11.12□□□□□ -0.63
TRAF4-209ENST00000473421 KIAA0040Q15053 153 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 RNPS1Q15287 305 aaKnown RBP11.12□□□□□ -0.63
TRAF4-209ENST00000473421 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.12□□□□□ -0.63
TRAF4-209ENST00000473421 GTF2IRD2BQ6EKJ0 949 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 NOXRED1Q6NXP6 359 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 Q6ZT83 130 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 GTF2IRD2Q86UP8 949 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 PIAS4Q8N2W9 510 aaPredicted RBP11.12□□□□□ -0.63
TRAF4-209ENST00000473421 NUP43Q8NFH3 380 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 C1QTNF6Q9BXI9 259 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 SHARPINQ9H0F6 387 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 RAB17Q9H0T7 212 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 CHODLQ9H9P2 273 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 NGBQ9NPG2 151 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 FANCFQ9NPI8 374 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 TMEM160Q9NX00 188 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 STOML1Q9UBI4 398 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 ICAM5Q9UMF0 924 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 KCNE3Q9Y6H6 103 aa11.12□□□□□ -0.63
TRAF4-209ENST00000473421 ARFGEF3Q5TH69 2177 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 GOLGA8QA0A0J9YX86 632 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 SERTM1A2A2V5 107 aa11.11□□□□□ -0.63
TRAF4-209ENST00000473421 GOLGA8OA6NCC3 632 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms