RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 COX4I1P13073 169 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 HK1P19367 917 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 RPS4Y1P22090 263 aaKnown RBP13.72□□□□□ -0.21
SNX13-205ENST00000471744 CHMP24386 653 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 PTGER4P35408 488 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 RBBP4Q09028 425 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 SF3B4Q15427 424 aaKnown RBP eCLIP13.72□□□□□ -0.212e-8■■■■□ 20.6
SNX13-205ENST00000471744 VASNQ6EMK4 673 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 CD163Q86VB7 1156 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 FAM26EQ8N5C1 309 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 BBS10Q8TAM1 723 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 ABTB1Q969K4 478 aaPredicted RBP13.72□□□□□ -0.21
SNX13-205ENST00000471744 ZBTB8AQ96BR9 441 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 SFXN2Q96NB2 322 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 LRRC37BQ96QE4 947 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 TREX2Q9BQ50 279 aaPredicted RBP13.72□□□□□ -0.21
SNX13-205ENST00000471744 PIGQQ9BRB3 760 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 SPATA9Q9BWV2 254 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 LAT2Q9GZY6 243 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 TP63Q9H3D4 680 aaPredicted RBP13.72□□□□□ -0.21
SNX13-205ENST00000471744 ARMC7Q9H6L4 198 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 STOML1Q9UBI4 398 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 KCNE5Q9UJ90 142 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 AP3M1Q9Y2T2 418 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 L3MBTL1Q9Y468 752 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 HRH3Q9Y5N1 445 aa13.72□□□□□ -0.21
SNX13-205ENST00000471744 UBR5O95071 2799 aaPredicted RBP13.71□□□□□ -0.21
SNX13-205ENST00000471744 ZIC3O60481 467 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 WDR1O75083 606 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 GABRA1P14867 456 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 ETS2P15036 469 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 IL7RP16871 459 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 ZNF17P17021 662 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 SLC6A2P23975 617 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 EIF1P41567 113 aaKnown RBP13.71□□□□□ -0.21
SNX13-205ENST00000471744 KCNJ10P78508 379 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 ZNF117Q03924 483 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 CRYZQ08257 329 aaKnown RBP13.71□□□□□ -0.21
SNX13-205ENST00000471744 LARS2Q15031 903 aaKnown RBP13.71□□□□□ -0.21
SNX13-205ENST00000471744 C3AR1Q16581 482 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 GXYLT1Q4G148 440 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 LIN52Q52LA3 116 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 RAET1LQ5VY80 246 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 REEP3Q6NUK4 255 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 OLIG3Q7RTU3 272 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 ARPINQ7Z6K5 226 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 SERPINA11Q86U17 422 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 KRT73Q86Y46 540 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 SLC30A8Q8IWU4 369 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 POU5F2Q8N7G0 328 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 C11orf65Q8NCR3 313 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 WDR60Q8WVS4 1066 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 ARSGQ96EG1 525 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 SH3YL1Q96HL8 342 aaPredicted RBP13.71□□□□□ -0.21
SNX13-205ENST00000471744 IKZF5Q9H5V7 419 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 RUBCNLQ9H714 662 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 KAT8Q9H7Z6 458 aaKnown RBP13.71□□□□□ -0.21
SNX13-205ENST00000471744 EFCAB1Q9HAE3 211 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 EXOSC3Q9NQT5 275 aaKnown RBP13.71□□□□□ -0.21
SNX13-205ENST00000471744 SPRR3Q9UBC9 169 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 TINAGQ9UJW2 476 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 PRDM4Q9UKN5 801 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 ICAM5Q9UMF0 924 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 ZNF232Q9UNY5 417 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 CARD8Q9Y2G2 431 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 SLC6A5Q9Y345 797 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 IFT52Q9Y366 437 aa13.71□□□□□ -0.21
SNX13-205ENST00000471744 LRRK2Q5S007 2527 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 C7orf72A4D263 438 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 CLEC18AA5D8T8 446 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 C17orf51A8MQB3 221 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 AHRRA9YTQ3 701 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 B4DXG7 233 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 E9PLN8 166 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 FXYD1O00168 92 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 AGFG2O95081 481 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 NUDT14O95848 222 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 THBS1P07996 1170 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 NUDT7P0C024 238 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 ESRRAP11474 423 aaPredicted RBP13.7□□□□□ -0.22
SNX13-205ENST00000471744 NID1P14543 1247 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 BMP7P18075 431 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 GFRA1P56159 465 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 MTPNP58546 118 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 CDK6Q00534 326 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 CBFBQ13951 182 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 CAPRIN1Q14444 709 aaKnown RBP13.7□□□□□ -0.22
SNX13-205ENST00000471744 MAPK11Q15759 364 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 MAPK14Q16539 360 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 CYP51A1Q16850 503 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 C1QL3Q5VWW1 255 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 TMEM211Q6ICI0 200 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 NANOGP8Q6NSW7 305 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 CLEC18BQ6UXF7 455 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 NET1Q7Z628 596 aaPredicted RBP13.7□□□□□ -0.22
SNX13-205ENST00000471744 DOLPP1Q86YN1 238 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 TREML1Q86YW5 311 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 ZNF440Q8IYI8 595 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 TMCO5AQ8N6Q1 288 aa13.7□□□□□ -0.22
SNX13-205ENST00000471744 CLEC18CQ8NCF0 446 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms