RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 RNF32Q9H0A6 362 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 KLHL1Q9NR64 748 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 DEPPQ9NTK1 212 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 CCM2LQ9NUG4 571 aaPredicted RBP17.54■□□□□ 0.4
PSPC1-203ENST00000471658 RYDENQ9NUL5 291 aaKnown RBP17.54■□□□□ 0.4
PSPC1-203ENST00000471658 SLC13A4Q9UKG4 626 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 EML6Q6ZMW3 1958 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 H3BNH8 94 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 ZNF264O43296 627 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 SLC25A12O75746 678 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 DIRAS1O95057 198 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 P04436 131 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 PSMA4P25789 261 aaKnown RBP17.53■□□□□ 0.4
PSPC1-203ENST00000471658 DNASE1L1P49184 302 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 ZNF136P52737 540 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 GPR85P60893 370 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 RPP38P78345 283 aaKnown RBP17.53■□□□□ 0.4
PSPC1-203ENST00000471658 IQCCQ4KMZ1 466 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 FAM98BQ52LJ0 330 aaKnown RBP17.53■□□□□ 0.4
PSPC1-203ENST00000471658 EIPR1Q53HC9 387 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 CMIPQ8IY22 773 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 OIT3Q8WWZ8 545 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 GEMIN6Q8WXD5 167 aaKnown RBP17.53■□□□□ 0.4
PSPC1-203ENST00000471658 ZNF524Q96C55 264 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 CHID1Q9BWS9 393 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.53■□□□□ 0.4
PSPC1-203ENST00000471658 TIMMDC1Q9NPL8 285 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 SACM1LQ9NTJ5 587 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 KLHL28Q9NXS3 571 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 CNIH4Q9P003 139 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 SLC35A3Q9Y2D2 325 aa17.53■□□□□ 0.4
PSPC1-203ENST00000471658 PINLYPA6NC86 204 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 H3BNX3 289 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 J3KTA2 159 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 AP3D1O14617 1153 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 HCRTR2O43614 444 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 SEMA7AO75326 666 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 SLC7A1P30825 629 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 RYKP34925 604 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 KCNAB2Q13303 367 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 SKP2Q13309 424 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 TBCELQ5QJ74 424 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 TMEM81Q6P7N7 255 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 TSPYL5Q86VY4 417 aaPredicted RBP17.52■□□□□ 0.4
PSPC1-203ENST00000471658 GRAMD2AQ8IUY3 354 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 ZDHHC21Q8IVQ6 265 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 FAM71CQ8NEG0 241 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 SLC39A7Q92504 469 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 DUS3LQ96G46 650 aaKnown RBP17.52■□□□□ 0.4
PSPC1-203ENST00000471658 ARMC7Q9H6L4 198 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 MAGIXQ9H6Y5 334 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 S100A14Q9HCY8 104 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 CTPS2Q9NRF8 586 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 MED11Q9P086 117 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 AP4S1Q9Y587 144 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 PCDHGA9Q9Y5G4 932 aaKnown RBP17.52■□□□□ 0.4
PSPC1-203ENST00000471658 WIF1Q9Y5W5 379 aa17.52■□□□□ 0.4
PSPC1-203ENST00000471658 TNRC6AQ8NDV7 1962 aaKnown RBP17.52■□□□□ 0.39
PSPC1-203ENST00000471658 GNB5O14775 395 aa17.51■□□□□ 0.39
PSPC1-203ENST00000471658 FKBP6O75344 327 aa17.51■□□□□ 0.39
PSPC1-203ENST00000471658 TIPRLO75663 272 aa17.51■□□□□ 0.39
PSPC1-203ENST00000471658 SP1P08047 785 aa17.51■□□□□ 0.39
PSPC1-203ENST00000471658 RAP2AP10114 183 aa17.51■□□□□ 0.39
PSPC1-203ENST00000471658 FUT4P22083 530 aa17.51■□□□□ 0.39
PSPC1-203ENST00000471658 ACAA2P42765 397 aaKnown RBP17.51■□□□□ 0.39
PSPC1-203ENST00000471658 RGS8P57771 180 aaPredicted RBP17.51■□□□□ 0.39
PSPC1-203ENST00000471658 SNTA1Q13424 505 aa17.51■□□□□ 0.39
PSPC1-203ENST00000471658 LINC00303Q3SY05 128 aa17.51■□□□□ 0.39
PSPC1-203ENST00000471658 SLC25A25Q6KCM7 469 aa17.51■□□□□ 0.39
PSPC1-203ENST00000471658 SLC30A6Q6NXT4 461 aa17.51■□□□□ 0.39
PSPC1-203ENST00000471658 TMCO5AQ8N6Q1 288 aa17.51■□□□□ 0.39
PSPC1-203ENST00000471658 PAPD5Q8NDF8 572 aaKnown RBP17.51■□□□□ 0.39
PSPC1-203ENST00000471658 ABHD17AQ96GS6 310 aa17.51■□□□□ 0.39
PSPC1-203ENST00000471658 LAT2Q9GZY6 243 aa17.51■□□□□ 0.39
PSPC1-203ENST00000471658 IL1RAPQ9NPH3 570 aa17.51■□□□□ 0.39
PSPC1-203ENST00000471658 SLC9A8Q9Y2E8 581 aa17.51■□□□□ 0.39
PSPC1-203ENST00000471658 CNTRLQ7Z7A1 2325 aa17.51■□□□□ 0.39
PSPC1-203ENST00000471658 NINQ8N4C6 2090 aa17.51■□□□□ 0.39
PSPC1-203ENST00000471658 ANKRD33BA6NCL7 494 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 MKRN2OSH3BPM6 223 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 IFNW1P05000 195 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 CNR1P21554 472 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 TNFSF10P50591 281 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 KCNC4Q03721 635 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 C17orf67Q0P5P2 114 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 C19orf48Q6RUI8 117 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 DEF8Q6ZN54 512 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 WDSUB1Q8N9V3 476 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 B4GALNT2Q8NHY0 566 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 FRMD6Q96NE9 622 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 DSN1Q9H410 356 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 NDUFAF4Q9P032 175 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 PPP4R1LQ9P1A2 415 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 ICAM5Q9UMF0 924 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 ZZEF1O43149 2961 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 EIF4E2O60573 245 aaKnown RBP17.5■□□□□ 0.39
PSPC1-203ENST00000471658 FABP3P05413 133 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 HTR2AP28223 471 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 CCR4P51679 360 aa17.5■□□□□ 0.39
PSPC1-203ENST00000471658 FOXD4Q12950 439 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms