RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 PROCRQ9UNN8 238 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 ACTL7BQ9Y614 415 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 KCNE3Q9Y6H6 103 aa14.61□□□□□ -0.07
COL9A3-208ENST00000469802 FREM1Q5H8C1 2179 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 DSCAMO60469 2012 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 A0A0J9YW62 118 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 OIP5O43482 229 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 SOX30O94993 753 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 SERPINE1P05121 402 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 IL11P20809 199 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 ELK4P28324 431 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 EIF1P41567 113 aaKnown RBP14.6□□□□□ -0.07
COL9A3-208ENST00000469802 SUMO3P55854 103 aaPredicted RBP14.6□□□□□ -0.07
COL9A3-208ENST00000469802 CLDN8P56748 225 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 FOXF1Q12946 379 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 MAD2L1Q13257 205 aaPredicted RBP14.6□□□□□ -0.07
COL9A3-208ENST00000469802 KRT71Q3SY84 523 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 TNFAIP8L3Q5GJ75 292 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 CBLN3Q6UW01 205 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 KRTAP1-3Q8IUG1 177 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 NUDCD3Q8IVD9 361 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 ZNF781Q8N8C0 355 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 ZNF527Q8NB42 609 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 OR2V1Q8NHB1 315 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 ADAMTS15Q8TE58 950 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 PRPF18Q99633 342 aaKnown RBP14.6□□□□□ -0.07
COL9A3-208ENST00000469802 HOXD1Q9GZZ0 328 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 SERHL2Q9H4I8 314 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 TMEM185BQ9H7F4 350 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 ZNF395Q9H8N7 513 aaPredicted RBP14.6□□□□□ -0.07
COL9A3-208ENST00000469802 PLSCR4Q9NRQ2 329 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 ZNF226Q9NYT6 803 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 NOP53Q9NZM5 478 aaKnown RBP14.6□□□□□ -0.07
COL9A3-208ENST00000469802 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.6□□□□□ -0.07
COL9A3-208ENST00000469802 HAO1Q9UJM8 370 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 MCTS1Q9ULC4 181 aaKnown RBP14.6□□□□□ -0.07
COL9A3-208ENST00000469802 FAF1Q9UNN5 650 aaPredicted RBP14.6□□□□□ -0.07
COL9A3-208ENST00000469802 EIF3LQ9Y262 564 aaKnown RBP14.6□□□□□ -0.07
COL9A3-208ENST00000469802 EMC9Q9Y3B6 208 aa14.6□□□□□ -0.07
COL9A3-208ENST00000469802 V9GYY5 206 aaPredicted RBP14.6□□□□□ -0.07
COL9A3-208ENST00000469802 NPIPA5A0A0B4J1W7 369 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 NPIPA7E9PJI5 369 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 C16orf97H3BN30 126 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 TNFSF11O14788 317 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 CASKO14936 926 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 TM9SF1O15321 606 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 BIRC5O15392 142 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 CXCL13O43927 109 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 NTN1O95631 604 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 NPIPA8P0DM63 369 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 ATP6V1C1P21283 382 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 LOXP28300 417 aaPredicted RBP14.59□□□□□ -0.07
COL9A3-208ENST00000469802 ADH6P28332 368 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 SHC1P29353 583 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 PPP2R2AP63151 447 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 CHI3L2Q15782 390 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 PDCD2Q16342 344 aaPredicted RBP14.59□□□□□ -0.07
COL9A3-208ENST00000469802 SPDYE7PQ495Y7 208 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 C22orf34Q6ZV56 151 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 CXorf67Q86X51 503 aaPredicted RBP14.59□□□□□ -0.07
COL9A3-208ENST00000469802 OR5AK3PQ8NH89 298 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 PHOSPHO1Q8TCT1 267 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 CHMP6Q96FZ7 201 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 KLHL15Q96M94 604 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 OR7D2Q96RA2 312 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 SORT1Q99523 831 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 MED18Q9BUE0 208 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 C20orf27Q9GZN8 174 aa14.59□□□□□ -0.07
COL9A3-208ENST00000469802 BEX4Q9NWD9 120 aaPredicted RBP14.59□□□□□ -0.07
COL9A3-208ENST00000469802 C6orf203Q9P0P8 240 aaPredicted RBP14.59□□□□□ -0.07
COL9A3-208ENST00000469802 PRR14LQ5THK1 2151 aa14.58□□□□□ -0.07
COL9A3-208ENST00000469802 ETV2O00321 342 aaPredicted RBP14.58□□□□□ -0.08
COL9A3-208ENST00000469802 RGS16O15492 202 aaPredicted RBP14.58□□□□□ -0.08
COL9A3-208ENST00000469802 EFNA2O43921 213 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 SNUPNO95149 360 aaKnown RBP14.58□□□□□ -0.08
COL9A3-208ENST00000469802 ME2P23368 584 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 HOXC12P31275 282 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 P2RX1P51575 399 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 ATP12AP54707 1039 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 ABCE1P61221 599 aaKnown RBP14.58□□□□□ -0.08
COL9A3-208ENST00000469802 ZNF239Q16600 458 aaKnown RBP14.58□□□□□ -0.08
COL9A3-208ENST00000469802 HBMQ6B0K9 141 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 ZNF550Q7Z398 422 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 CLECL1Q8IZS7 167 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 LILRA2Q8N149 483 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 OR8J2Q8NGG1 315 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 OR5D16Q8NGK9 328 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 PPP1R14CQ8TAE6 165 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 RNF128Q8TEB7 428 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 SDF2Q99470 211 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 PRRG4Q9BZD6 226 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 NMUR2Q9GZQ4 415 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 AKTIPQ9H8T0 292 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 GLRX2Q9NS18 164 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 CLEC4AQ9UMR7 237 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.58□□□□□ -0.08
COL9A3-208ENST00000469802 RAP2CQ9Y3L5 183 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 DTNAQ9Y4J8 743 aa14.58□□□□□ -0.08
COL9A3-208ENST00000469802 GPC6Q9Y625 555 aaPredicted RBP14.58□□□□□ -0.08
COL9A3-208ENST00000469802 ARID1AO14497 2285 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms