RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 WT1P19544 449 aaPredicted RBP9.29□□□□□ -0.92
PMF1-204ENST00000466489 PRKACGP22612 351 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 RAB25P57735 213 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 PLIN5Q00G26 463 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 SCN1BQ07699 218 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 AIMP2Q13155 320 aaKnown RBP9.29□□□□□ -0.92
PMF1-204ENST00000466489 DGCR6Q14129 220 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 EXT1Q16394 746 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 DCAF10Q5QP82 559 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 DNAJC14Q6Y2X3 702 aaPredicted RBP9.29□□□□□ -0.92
PMF1-204ENST00000466489 HSDL2Q6YN16 418 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 PTCHD4Q6ZW05 846 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 AHSA2Q719I0 299 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 NDUFAF7Q7L592 441 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 CPEB2Q7Z5Q1 589 aaKnown RBP9.29□□□□□ -0.92
PMF1-204ENST00000466489 UBE3DQ7Z6J8 389 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 CDH24Q86UP0 819 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 LAPTM4BQ86VI4 370 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 PTOV1Q86YD1 416 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 ENTHD1Q8IYW4 607 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 CYP4Z2PQ8N1L4 340 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 MFSD4AQ8N468 514 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 FAM86B1Q8N7N1 296 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 PROKR2Q8NFJ6 384 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 CDC26Q8NHZ8 85 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 TRIM63Q969Q1 353 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 ZBED6CLQ96FA7 236 aaPredicted RBP9.29□□□□□ -0.92
PMF1-204ENST00000466489 APIPQ96GX9 242 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 CSF3RQ99062 836 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 INPP5KQ9BT40 448 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 TRAF4Q9BUZ4 470 aaPredicted RBP9.29□□□□□ -0.92
PMF1-204ENST00000466489 SORBS1Q9BX66 1292 aaKnown RBP9.29□□□□□ -0.92
PMF1-204ENST00000466489 UCK2Q9BZX2 261 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 ANKRD19PQ9H560 264 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 LANCL2Q9NS86 450 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 GIMAP4Q9NUV9 329 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 TAS2R7Q9NYW3 318 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 GMPR2Q9P2T1 348 aaKnown RBP9.29□□□□□ -0.92
PMF1-204ENST00000466489 RABL2AQ9UBK7 228 aaPredicted RBP9.29□□□□□ -0.92
PMF1-204ENST00000466489 FBXL4Q9UKA2 621 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 ADAM30Q9UKF2 790 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 RABL2BQ9UNT1 228 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 SLC9A8Q9Y2E8 581 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 GSTK1Q9Y2Q3 226 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 HS3ST3B1Q9Y662 390 aa9.29□□□□□ -0.92
PMF1-204ENST00000466489 LOC102723996A0A087X1L8 192 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 FAM172BPA6NC97 362 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 MKRN2OSH3BPM6 223 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 ERVH48-1M5A8F1 160 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 CYR61O00622 381 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 SNPHO15079 494 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 PROM1O43490 865 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 XPNPEP2O43895 674 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 TMEM127O75204 238 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 COQ9O75208 318 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 ATP6V1G1O75348 118 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 TNFRSF21O75509 655 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 FADS2O95864 444 aaKnown RBP9.28□□□□□ -0.92
PMF1-204ENST00000466489 MT-ND2P03891 347 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 GBAP04062 536 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 SCG5P05408 212 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 LAMP1P11279 417 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 OSMP13725 252 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 MYL12AP19105 171 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 ITGA3P26006 1051 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 RPS5P46782 204 aaKnown RBP9.28□□□□□ -0.92
PMF1-204ENST00000466489 WNT3P56703 355 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 VLDLRP98155 873 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 EEF1A2Q05639 463 aaKnown RBP9.28□□□□□ -0.92
PMF1-204ENST00000466489 ST3GAL4Q11206 333 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 TAB1Q15750 504 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 OCLNQ16625 522 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 TMEM201Q5SNT2 666 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 ATP1A1-AS1Q5TC04 95 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 NDUFAF5Q5TEU4 345 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 FAM69BQ5VUD6 431 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 MRM1Q6IN84 353 aaKnown RBP9.28□□□□□ -0.92
PMF1-204ENST00000466489 METAP1DQ6UB28 335 aaPredicted RBP9.28□□□□□ -0.92
PMF1-204ENST00000466489 TMEM205Q6UW68 189 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 KIRREL2Q6UWL6 708 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 GALNT5Q7Z7M9 940 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 CLDN22Q8N7P3 220 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 GDPD1Q8N9F7 314 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 OR11G2Q8NGC1 345 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 CNIH3Q8TBE1 160 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 PMM1Q92871 262 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 DAZLQ92904 295 aaKnown RBP9.28□□□□□ -0.92
PMF1-204ENST00000466489 RBM18Q96H35 190 aaKnown RBP9.28□□□□□ -0.92
PMF1-204ENST00000466489 TMEM80Q96HE8 168 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 ART5Q96L15 291 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 DGAT2Q96PD7 388 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 SNX18Q96RF0 628 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 SLC30A2Q9BRI3 323 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 SLC35A5Q9BS91 424 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 MED18Q9BUE0 208 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 ZNF717Q9BY31 904 aaPredicted RBP9.28□□□□□ -0.92
PMF1-204ENST00000466489 OR2B2Q9GZK3 357 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 NAA50Q9GZZ1 169 aaKnown RBP9.28□□□□□ -0.92
PMF1-204ENST00000466489 ADAP2Q9NPF8 381 aa9.28□□□□□ -0.92
PMF1-204ENST00000466489 KCMF1Q9P0J7 381 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms